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PLM4_5_b1_sep16_scaffold_48841_2

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 819..1397

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 192.0
  • Bit_score: 322
  • Evalue 4.60e-86
RNA polymerase subunit sigma-54 Tax=Thiobacillus denitrificans RepID=UPI00037510B5 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 192.0
  • Bit_score: 324
  • Evalue 4.30e-86
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 192.0
  • Bit_score: 334
  • Evalue 7.60e-89

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Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGTGGCTCGCCGCGTTAAATCCCGACGCGATGCCGAAGCTGCGCATCAACCGCCTCTACGCCGACATTCTGCAGCGCAACCGCGACGCCGGGCACCAGCAGCTCGCCGGCCAGCTGCAGGAAGCGCGCTGGCTCATCAAGAACGTCCAGCAGCGCTTCGACACCATCTTGCGCGTGTCGCAGGCCATCGTCGACCGCCAGCGCCATTTTTTCGAGCACGGCGAAGTCGCGATGCGCCCGCTGGTCCTGCGCGAAATCGCGGATACGCTGGACCTGCACGAATCGACGGTTTCGCGCGTGACCACCCAGAAATTCATGTTCACGCCGCGCGGCATTTACGAGCTCAAATACTTTTTCGGCAGCCACGTGACCACCGATACCGGCGGCTCGGCATCGAGCACGGCGATCCGCGCGTTGATCAAGCAGCTCGTCAGCGCGGAAAATGGCAAGAAACCGCTGTCCGACAGCCAGATCTCGGAAATTCTCGGTCAGCAGGGCATCGTCGTCGCGCGCCGCACCGTCGCCAAGTACCGCGAGTCGATGCAGATATTGCCGGTCAACCTGCGCAAATCGCTGTGA
PROTEIN sequence
Length: 193
VWLAALNPDAMPKLRINRLYADILQRNRDAGHQQLAGQLQEARWLIKNVQQRFDTILRVSQAIVDRQRHFFEHGEVAMRPLVLREIADTLDLHESTVSRVTTQKFMFTPRGIYELKYFFGSHVTTDTGGSASSTAIRALIKQLVSAENGKKPLSDSQISEILGQQGIVVARRTVAKYRESMQILPVNLRKSL*