ggKbase home page

PLM4_5_b1_sep16_scaffold_2228_6

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3345..5000)

Top 3 Functional Annotations

Value Algorithm Source
4-Amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KBR0_CUPNH bin=16ft_combo_ws3_JS1 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 529.0
  • Bit_score: 506
  • Evalue 2.30e-140
glycosyl transferase family 39 similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 494.0
  • Bit_score: 228
  • Evalue 3.40e-57
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 529.0
  • Bit_score: 506
  • Evalue 3.20e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1656
ATGAGCGAGCCCGCGATCGCCGAACCGGCGGTCGGGGTCGAGGAGCGCAGGCACCCGGTTCCGCCGCCCGCCGTGGCTGCTGCGTTGCTGATCGGCGCGGTGATGATCGGAACCGCCGCGCTCGGCGGTCTGTTCGAGACGACCGAGACCCGCTACGCCGAGATCGCACGCGAGATGCTGGCGAGCGGCGACTGGCTGGTGCCGCGTCTCAACGGCATCATGCACCTCCACAAACCGCCGTTGTCCTACTGGGCGGCGGCGATCGGCATGAAGGCGCTGGGCGAGGATTCCGCCGGCGCCCGGATCCCGGCGGCCCTCGCCGGTGTGGTGATGCTGATCGCGCTCGCATACGCGTCGCGCCGCCGGTTCGCGACGCTGGCGGGCGACTCGCCGCTCGCCGTCTGGCTGCTCGGCACCTCGGTCCTGTTCGTAGCGCTGTCCCGATCGCTCGCGTCCGATCCGTTCCTCGGGGCCGGCGTCGCACTGTTCTGGGCGTGCGCGCCCTCCCCCTGGGCGTTGGCGGGAATCGGGATCGGATTTCTCGCCAAGGGACCGGTGGTGCTGGTCCACACCCTGCTCCCGGTGCTGGTGCTGGGTCTCTGGCAGCGTGACCGCCGCGTGCTCGGACGGCTCGCTCCCGCGTGGGGATGGTGGATCGCGGCCGCGATCGGATTGCCGTGGTTCATCACCGTGATCCTGAAGGTGCCGGGTCTGCTGTCGTACTTCCTCGTCAATCAGACGTGGGAGCGCTTCACGACCACGATTCATCAGCGGGGCGGACCTCCCTGGTATTTCGTGGCGGTGCTGATCGGCGGGATGCTGCCGTGGACGCCGCTCCTGATCGCGGGCATCGGCAAGGCCATCCGCACGCTGCGATCCACGGCGTCGCCCCATTCAACCGCGGCGCGCGCGGCCGACGAGACGCGTGCCGCTCTCGCGTGGCTGTTCGTGCCGCTCGTGTTCTTCTCGTTTTCGGGCTCCAAGCTGCCGGCCTACCTGCTGCCCTGCCTGCCGGCCGCCGCGCTGCTCACCGCATCCGGCGCAGGCTCCGTCATCGCGCGCAGGATGTCCGCGCTCCTGCTCGCGCTGCTCGCGGTGGTCGGCGCGTTCGCAGGGCCGTCGATTCTTGCGAAACAGATGTCGCTCGATCTCGCACATCCCCTTCCTCTGGCGGCCGGGCTGTGGGCGGCGCTCGCGGCGTTCGCCCTCGCCTCGTTCTGGACGCTGCGCGGGCGATTGGTGGCGGCTGCGATGGTGGTGGTGGTGGCGTGGGCGGCAATCGGGATCGGCCTGGCGCCCTACGAAGGTCCACTCGGGTCGCCACGACCGGCGATCCGGCTGCTGGCATCGCAGGTACGCCCGCACGAGCCGGTGATCGAAGTCGAGACGTTCAGCTCCGCCGTGCCGTTCTATCTCGGGCGCACGGTTCTGCTCCTCGACGTTCCGCGCGAGCGGCGTCTCGATGTGTCGGCCGCGCTGGCCGCCGTGACCGTGACCGCGGATTCGCTTCCGGTGCTGGTGGAGCGTCATGGACGGGTGTGGCTGGTGGGTCCGGAGCCGGCGGTGCGCGCGCTCGCCGACCGGACGCAACTGCGGTTCTCGGCTCTGACGTACTGGCGGGGCCAGATCATCGGCTTCGTCGCGCGATCCGGCTGA
PROTEIN sequence
Length: 552
MSEPAIAEPAVGVEERRHPVPPPAVAAALLIGAVMIGTAALGGLFETTETRYAEIAREMLASGDWLVPRLNGIMHLHKPPLSYWAAAIGMKALGEDSAGARIPAALAGVVMLIALAYASRRRFATLAGDSPLAVWLLGTSVLFVALSRSLASDPFLGAGVALFWACAPSPWALAGIGIGFLAKGPVVLVHTLLPVLVLGLWQRDRRVLGRLAPAWGWWIAAAIGLPWFITVILKVPGLLSYFLVNQTWERFTTTIHQRGGPPWYFVAVLIGGMLPWTPLLIAGIGKAIRTLRSTASPHSTAARAADETRAALAWLFVPLVFFSFSGSKLPAYLLPCLPAAALLTASGAGSVIARRMSALLLALLAVVGAFAGPSILAKQMSLDLAHPLPLAAGLWAALAAFALASFWTLRGRLVAAAMVVVVAWAAIGIGLAPYEGPLGSPRPAIRLLASQVRPHEPVIEVETFSSAVPFYLGRTVLLLDVPRERRLDVSAALAAVTVTADSLPVLVERHGRVWLVGPEPAVRALADRTQLRFSALTYWRGQIIGFVARSG*