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PLM4_5_b1_sep16_scaffold_2884_7

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 4130..4336

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family Tax=Synergistetes bacterium SGP1 RepID=D4MAW8_9BACT bin=16ft_combo_ws3_JS1 species=Fretibacterium fastidiosum genus=Fretibacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 68.0
  • Bit_score: 99
  • Evalue 1.40e-18
Cold-shock protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 68.0
  • Bit_score: 89
  • Evalue 3.10e-16
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 68.0
  • Bit_score: 99
  • Evalue 1.90e-18

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 207
ATGGCGCGTGGCACCGTGAAGTGGTTCAACGATCAGAAGGGATACGGTTTCATTTCCACGGAAGGTGCGCAGGATGACGTCTACGTGCACTTCTCCGCCATCGAGGGCCGCGGATTCCGTACGCTCCATGAAGGGGAGCTGGTGGAATTCGAAGTCAGTTCGACGGAGCGGGGGCAGCATCAAGCCTCGCATGTGATCAGGATCTAG
PROTEIN sequence
Length: 69
MARGTVKWFNDQKGYGFISTEGAQDDVYVHFSAIEGRGFRTLHEGELVEFEVSSTERGQHQASHVIRI*