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PLM4_32_b1_sep16_scaffold_784_9

Organism: PLM4_32_b1_sep16_Rokubacteria_71_14

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(7286..10543)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 874.0
  • Bit_score: 797
  • Evalue 4.70e-228
Transcription-repair coupling factor bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 1085.0
  • Bit_score: 1545
  • Evalue 0.0
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 1085.0
  • Bit_score: 1547
  • Evalue 0.0

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3258
ATGATCGTGCCTCCCGAGTCTGTTCTGTCCCGGTGGGCCGCGCTCGACGATGTCCTCGCGGCCCTCGCCCGGGGAGTACCCTGCCTGCGCGCCGACGGCCTCTGGGGCTCCTCGCGCGCCCTGGTGGTGGCGGCGCTGCGCCAGCGCACCGGACGGCCGATCCTCCTGCTCACGCCGGGTCCGTCGCCGCGTCACCGGATGGCGCAGGATGCCGCCTTCTTCGTGTCCTCGCTCTCGGGCGGCCCCGCGGTGGGCGGTGACGACGGCGAGGACAGCCGCGTGCTCGAGTTCCCGTCGGGCACCGGTGCCTCCTGGCGCGGCACCCGCCATCGCGAGCCCGACGCCGAGCGCGCGCTGTGCTGCCGCCGCCTGCTCGACGGCGACGCGGTGGTGATCGTGGCCACGCCCTCCGGGCTCTCGGAGCCGGTGCCGCCGCCCTCCGCCTTCAAGCGTCGCACGTTCAGTTTGATGGTCGGGGAGAGCAGCGACCGCGAGATCCTGCTCGAGCTGCTCGAGGCGGCCGGGTACGAGCGCGTCGAGACCGTGATGGAGGTCGGGCAGTGGAGCGTGCGCGGCGGCATCGTGGACATCTTCTCGCCCACCCACGAGCGGCCGGTGCGCGTCGAGTTCGTCGGTGACGAGGTGGAGTCCCTCCGCGTCTTCGATCCCACCACCCAGCGCTCGATCGCGCCGCTCCGCGAGCTGACGGTGCTGCCGCTCGGCTCGAAGGACGCGGCGCCGGTCACCCTGGTGGACTACCTGCCGCCCGGGACCCTGGTGGTGCTCGAGGATCCCGCCATGCTGGAGGCGCCGCCGGACGACGCGCCCTCGGCGGCCCCGCTCGCCTCCGTGCTCGACCGCTTCCAGCGGCTCGAGCTGCCGCTCCTCCAGCGCAGCGAGGGCGCGGCGCCCCGCGTCCCGATGGGCACCCGATCGATCGGCGGCTACCGCGGCCAGTTCAAGGCGCTGGCCGGCGAGATCCGCACCTGGCGGGGCGAGGGCTTCACGGTGCGCCTGGTGGTCGATGACGAGCGGCAGAGCCAGCGGCTGCGTCAGATGCTGGCCGAGCATGATCTCGAGCCGTGGCCCGAGGGGACCCTCTGGAGCCAGGAAGGGCTCGCGGTGGTGGTGGGCGAGTGCGGGGCGGGCTTCCAGATCCCGGCGCTCGGCCTCATCGTGCTCTGCGAGGAGGAGATCTTCGGGGCCCAGCGCCGCCGCCTCCGGCGCCCGCTCTTCCAGCGCGGCGCGGCCATCGCCTCGTTCAACGACCTGGCCTCCAACGACCTGGTGGTGCACGAGCAGCACGGCATCGGCCGCTACCACGGCCTCCGCACCCTGTCCTCCGAGGGGCACGACGCCGACTTCCTGCTGCTGGAGTACGCCGACGGCGGCCGGCTCTACCTGCCCGTCGAGCGGCTCGACCTGATCTCCAAGTACATGGGCGCGCCCGAGGGCTCGGCGCGGCTCGACCGGCTCGGGGGCGGCGCGTGGCAGCGCCTGAAGGAATCGGTGCGGGCCGCGCTGCGCGACATGGCGGAGGCCCTGCTCAAGCTCTACGCCACCCGCTCGGTCGCCGAGCGGCCGCACTTCTCGGACGACACGCCCTGGCAGGGCGAGTTCGAGGCCGCCTTCCGCTTCGAGGAGACGCCGGACCAGCTCCGGGCCATCGAGGAAGTGAAGACCGACATGGTGGGCGGCCGTCCGATGGACCGCCTGGTGGCGGGCGACGTCGGCTACGGCAAGACGGAGGTCGCGCTCCGCGCGGCCTTCAAAGCGGTGGCGGACGGCCGGCAGGTGGCGGTGCTCGTGCCCACCACCGTGCTGGCCCAGCAGCACTTCAACACGTTCGTGGAGCGGTTCGGCCCGTTCCCGGCGCGGGTCGAGCTGCTCTCGCGCTTCCGCAGCCCGAAGGAGCAGAAGCAGGTGGTGGCGGGGCTCGCCGCCGGCGCGGTGGACGTGGTGGTGGGCACGCACCGGCTCCTGTCCAAGGACGTGTCGTTCAAGAACCTCGGGCTCCTGGTGGTGGACGAGGAGCACCGCTTCGGCGTCTCCCACAAGGAGCGGGTCAAGCAGCTCCGCACCTCGGTGGACGTGTTGACGCTCACCGCCACCCCGATCCCGCGCACCCTCCACATGGCGCTCTCCGGGGTGCGCGACCTCTCGGTCATCGAGACGCCGCCGCTCGACCGGCTGCCGGTGGAGACGGTGGTCACCGCGTTCAGCCGCACCGTCATCAAGGAGGCGATCGAGCGGGAGCTGAACCGGGGCGGGCAGGTCTTCTTCGTCCACAATCGCATCCAGTCGCTCGCCTCCATGACCACCTTCATCAAGAGCCTGGTCCCGGAGGCCCGGGTGGTGATGGGGCACGGCCAGATGGCGGAGCGGGAGCTGGAGAGCGTGATGGTCAAGTTCGTGGACGGCCAGGCCGACGTGCTGGTCTCGACATCCATCGTGGAATCGGGCCTGGACATCCCGGCCTCGAACACGATAATCATCAACCGGGCCGACCGTTTCGGCCTGGCCCAGCTCTACCAGCTCCGGGGCCGGGTGGGGCGGGAGCGGCAGCAGGCCTACGCCTACCTCATGGTGCCCGCCGACGGGCGGGTGGACGAGACCGCCCAGCGGCGGCTGCGGGTGATCGAGGAGTCCACCGAGCTGGGGGCGGGGCTCCGGCTGGCCATGCGGGATCTGGAGATCCGGGGCACCGGCAACCTGCTGGGGGCGGCCCAGCACGGGCACATCGCCGCCGTCGGATTCGATCTTTACAGCAAGCTCCTCGCGGAGGCCGTGAGAGAATTGAAGGGCGAACCGGCGACCGAGCGCGTCGACCCGGTAATCTCGGCGGACGTGGAAGCGCTCCTGCCCGAGGCGTACGTTCCCGAGGTGAATCAGCGCCTGGCGCTCTACAAGCGGCTGGCCGAGATCGAGCGGTCCGAGGACGTCGCCGACGCGCGCGCGGAGCTGACCGATCGCTACGGCCCGCCGCCGCCCGCGGTCGAGGGGCTGCTGGACGTGGTGGGGCTCCGGGTGGCCGCCCGGGCGCTCGGCATCGAGAGGGTGGAGGCGGGCGGCGGGCGCGCGGTCCTGACCTTCGCGGCGTCGACCCCGGTCACGCCGGAACGGATGCTCAAGACGATCGCGGCCAGCCGCGGCGCTCTGAAACTCAGAAAGGAGTACACGGTGGAAGCGCGGATCCCTGCCGAACCCTGGCCCGCGGTGCGCGACGCCCTCGCGAAGCTCCTGGATTCCCTCCGATGA
PROTEIN sequence
Length: 1086
MIVPPESVLSRWAALDDVLAALARGVPCLRADGLWGSSRALVVAALRQRTGRPILLLTPGPSPRHRMAQDAAFFVSSLSGGPAVGGDDGEDSRVLEFPSGTGASWRGTRHREPDAERALCCRRLLDGDAVVIVATPSGLSEPVPPPSAFKRRTFSLMVGESSDREILLELLEAAGYERVETVMEVGQWSVRGGIVDIFSPTHERPVRVEFVGDEVESLRVFDPTTQRSIAPLRELTVLPLGSKDAAPVTLVDYLPPGTLVVLEDPAMLEAPPDDAPSAAPLASVLDRFQRLELPLLQRSEGAAPRVPMGTRSIGGYRGQFKALAGEIRTWRGEGFTVRLVVDDERQSQRLRQMLAEHDLEPWPEGTLWSQEGLAVVVGECGAGFQIPALGLIVLCEEEIFGAQRRRLRRPLFQRGAAIASFNDLASNDLVVHEQHGIGRYHGLRTLSSEGHDADFLLLEYADGGRLYLPVERLDLISKYMGAPEGSARLDRLGGGAWQRLKESVRAALRDMAEALLKLYATRSVAERPHFSDDTPWQGEFEAAFRFEETPDQLRAIEEVKTDMVGGRPMDRLVAGDVGYGKTEVALRAAFKAVADGRQVAVLVPTTVLAQQHFNTFVERFGPFPARVELLSRFRSPKEQKQVVAGLAAGAVDVVVGTHRLLSKDVSFKNLGLLVVDEEHRFGVSHKERVKQLRTSVDVLTLTATPIPRTLHMALSGVRDLSVIETPPLDRLPVETVVTAFSRTVIKEAIERELNRGGQVFFVHNRIQSLASMTTFIKSLVPEARVVMGHGQMAERELESVMVKFVDGQADVLVSTSIVESGLDIPASNTIIINRADRFGLAQLYQLRGRVGRERQQAYAYLMVPADGRVDETAQRRLRVIEESTELGAGLRLAMRDLEIRGTGNLLGAAQHGHIAAVGFDLYSKLLAEAVRELKGEPATERVDPVISADVEALLPEAYVPEVNQRLALYKRLAEIERSEDVADARAELTDRYGPPPPAVEGLLDVVGLRVAARALGIERVEAGGGRAVLTFAASTPVTPERMLKTIAASRGALKLRKEYTVEARIPAEPWPAVRDALAKLLDSLR*