ggKbase home page

PLM4_32_b1_sep16_scaffold_3550_3

Organism: PLM4_32_b1_sep16_Rokubacteria_71_14

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 1417..4830

Top 3 Functional Annotations

Value Algorithm Source
Two-component hybrid sensor and regulator Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RB0_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 570.0
  • Bit_score: 527
  • Evalue 2.60e-146
two-component hybrid sensor and regulator similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 570.0
  • Bit_score: 527
  • Evalue 7.40e-147
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 1167.0
  • Bit_score: 1231
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3414
ATGGCCAGGCGCCGGCGGCTGTTCTGGAAGTACGTCGTCTTCTTCACCCTCCTCGTCACCGTCGCCCTGCTCGCCAGCGGCCTCATCGAGATCTACTTCTCCTACCAGGAGAGCAAGGTGGTGCTCGGGGCCCTCCAGCGGGAGAAGGCGCAGGCCGCGGCCGTCCGGATCGAGGGGTTCATCACCGAGATCGAGCGCCAGATGGGCTGGGTGACCCAGCCCCGCGCGGTGGCGGCCGCCCCGCTCGAGCAGCGACGCTTCGACTTCTACCGCCTGCAGCGGCAGGTGCCCCCGATCACCGAGATCAGCTATATCGATCCCACCGGGCGGGAGCAGGTGCGCGTCTCCCGCCTCGCCATGGACGTGTTCGGCAGCAACCTCGACCTGTCGGCCGACCCGCGCTTCACGGAGGCCCGCGCCCGCCGGCTCTACCGGGGGCCCGTGTACTTCCGCAAGGAGTCGGAGCCCTACATGGCCATCGCCATCGCCGAGGGCGGGCAGGGCGGCGGCGTCACCGCGGCGGAGGTGAACCTCAAGTTCATCTGGGACGTGGTGTCCCAGATCAAGGTGGGCAAGGCCGGGCAGGCCTTCGTGGTGGACGGGCAGGGGGCGCTGATCGCGCACCCCGACATCAGCCTGGTGCTCCAGAAAACCGATCTCGGGCGGCTGGCGCACGTCAAGGCCGCGCTCACGCCCTCCCCGGCCCCCGGCGACGCGGCGGATACCGCGACCGTCGCCCGCAATCTGAAGGACCAGCGGGTGCTGACCGCCCACGTCACGATCCCGTCGCTGCGCTGGACGGTCTTCGTGGAGCTGCCGCTGGAGGAGGCCTTCGCCCCCCTGGAGGCCTCGGTCCGGCGCACCGTGCTCCTTGAGCTGATCGGCATCGCCCTGTCGGTGATCGTCAGCCTGATCCTGGCCCGCACCATGGTGAAGCCGATCCGCGCGCTGCAGGCGGGAGCGGCCCGATTCGGCGAGGGCAACCTGACCGACCGCATCGCGGTGCACACCGGCGACGAGCTGGAAGGGCTGGCCGAGCAGTTCAACAGCATGGCGGGCAAGCTCCATGAATCGTACGCGGGCCTCGAGCGCAAGGTCGAGGAGCGCACCCACGAGCTGAGCGAGGCGCTCGAGCAGCAGACCGCGACCGCCGAGGTGCTGCGGGTCATCAGCAGCTCGCCGACCGATCTGCAGCCGGTCATGGACGCGGTCGTGGAGAGTGCCGCGCGCCTGTGTGGCGCCCAGAACGCCCAGATCTTCCAGATCGAAGGGACGACCATGCGGCTCGTGGCCCGCCACGGCCCGGTCACGTCCAGCCTGGAAGCCGGCGAGACGAGGCCGCTGACCCGCGGCTCGGTGTCAGGCCGGGTCGCCCTCGAGCGCCGCACCCTCCGGATCGACGACCTGCGGGTCAACCTCCAGGCGGAGTATCCCGACATCGCCGCGGCCATCCAGCGCCAGGGCATCGCGGCCACCGTCGGGGTACCGCTGCTGCGCGAGGGCGTCGCCATCGGGGCGATCACCGCGTTCCGGACGGAGGCGCGGCCCTTCACCGACCAGCAGGTCGCGCTGCTGGAGACCTTCGCGGACCAGGCGGTGATCGCGATCGAGAACGTGCGCCTGTTCCAGGAGCTGCAGGTGCGCAACCGCGCCCTGACCGAGTCCCTGGAGCAGCAGACCGCGACCGCCGAGATCCTCCGGGTCATCAGCAGCTCGCCGACGGACCTCCAGCCCGTCCTGGAGGCGGTCGCGGCCAATGCGGCCCGGGTGTGCGAGGCCTCGGACGCGGTGGTGCTGCGGGTGGACGGGGACGCGCTCAAGGTGGTCGCGAACTACGGCGCGATTCCCGCGATGGCGGCCGCGCAGCCCATCGGCCCCGACTGGGTGGCGGGCCGCTCGGTGGTCGAGCGCCGGCCCGTGCACGTCGCCGATCTCGCGGCCGAGCTCGGGGAGTACCCGCGCTCCCGAGCGATGCAGGAGCGAACGGGCCACCGGACCATCGTGGCCATGCCGATGCTCCGGGAGGGCGTGCCCATCGGGGTCATCGTCATCCGCCGGATGGAGGTCAGACCGTTCAGCGACAAGCAGGTCGCGCTGCTCGAGACCTTCGCGGACCAGGCGGTGATCGCGATCGAGAACGTGCGCCTGTTCCAGGAATTGCAGGCACGCACCCATGACCTGTCGCAGTCGCTGGAGGAGACCGGGGCGCTCAGCGAGGTCATCCGGGCGGTCAGCTCCTCGCTCGACCTCCGCGAAGTCCTCGACGCGGTCGCGCGCCGGGCCGTCACCCTCGCCGGGGCGGACGGCTGCGGCATCTTCGAGTACAGTCCCGACCGCGGGAGGTTCGACGCGGTCGTCAGCCAGTGGATCAGCCGTCGGTTCCTGGACACGATCCCGGTCGCCATGAACCAAGGCACGCTCGGCCGGGCGACTCAGAGCGGGGAGCCGGTGCAGGTCGCCGACGTGCAGGCGGTGCCCGACTACCCGTTCCGGGATCGCCTCGTCGCGGAAGGCCTGCGCGCGGTGCTCACGGTGCCGATGATGGGCGGGGATGTCGCGCGGGGCATCGTGCTCTTCCGCCGCACCCCCGGCGAGTTCGGCGAGCGGGTGGTGACGCTCATGCGGACCCTGGCGGACCAGTCCAAGGTCGCGATCGCCAACGCGCACCTCTTCCGGGAGATCGAGGAGAAAGGCCGGTTGCTCGAGGTGGCCAACCAGCACAAATCGGAGTTCCTCGCCAACATGTCGCACGAGCTGCGGACGCCGCTGAACGCCATCATCGGATTCTCGGAGGTGCTGCTGCAGCGCATGTTCGGCGAGCTGAACCCCAAGCAGGACGAGTACCTCCAGGACGTCCTGTCCTCGGGGCGCCACCTGCTCTCGCTCATCAACGACATCCTCGATCTCTCCAAGGTGGAGGCGGGCCGCATGGAGCTGGAGCTGGCGCGCTTCGACCTGCCCCAGGCCCTCCAGGACACCCTGGTGCTGGTGCGCGAGCGCGCGGTCCGGCACGGGATCGACCTCCACCTCGACGCGGACGCCCGTCTCGGCGCCCTGGTGGCCGACGAGCGGAAGATCAAGCAGGTGATGCTGAACCTCCTGTCCAACGCGGTGAAGTTCACGCCGGAGGGCGGCCGCGTGGAGGTGCGCGCGGTGCCCACCGACGGCGCGGTGGAGATCTCGGTGGCCGACACCGGCATCGGGATCGCGCCGGAGAACCAGGAGCTGATTTTCGAGGAGTTCCGGCAGGTGGGCGGCGACTACGCCCACAAGCGGGAGGGCACGGGACTCGGCCTGACCCTCGCCCGCAAGCTCGTGGAGCTGCACGGCGGCCGCCTCTGGGTGAAGAGCCAGGTCGGCCAGGGCTCCACGTTCACCTTCTCTGTTCCGGAGCGACCATGGCCGGCGAGCTGA
PROTEIN sequence
Length: 1138
MARRRRLFWKYVVFFTLLVTVALLASGLIEIYFSYQESKVVLGALQREKAQAAAVRIEGFITEIERQMGWVTQPRAVAAAPLEQRRFDFYRLQRQVPPITEISYIDPTGREQVRVSRLAMDVFGSNLDLSADPRFTEARARRLYRGPVYFRKESEPYMAIAIAEGGQGGGVTAAEVNLKFIWDVVSQIKVGKAGQAFVVDGQGALIAHPDISLVLQKTDLGRLAHVKAALTPSPAPGDAADTATVARNLKDQRVLTAHVTIPSLRWTVFVELPLEEAFAPLEASVRRTVLLELIGIALSVIVSLILARTMVKPIRALQAGAARFGEGNLTDRIAVHTGDELEGLAEQFNSMAGKLHESYAGLERKVEERTHELSEALEQQTATAEVLRVISSSPTDLQPVMDAVVESAARLCGAQNAQIFQIEGTTMRLVARHGPVTSSLEAGETRPLTRGSVSGRVALERRTLRIDDLRVNLQAEYPDIAAAIQRQGIAATVGVPLLREGVAIGAITAFRTEARPFTDQQVALLETFADQAVIAIENVRLFQELQVRNRALTESLEQQTATAEILRVISSSPTDLQPVLEAVAANAARVCEASDAVVLRVDGDALKVVANYGAIPAMAAAQPIGPDWVAGRSVVERRPVHVADLAAELGEYPRSRAMQERTGHRTIVAMPMLREGVPIGVIVIRRMEVRPFSDKQVALLETFADQAVIAIENVRLFQELQARTHDLSQSLEETGALSEVIRAVSSSLDLREVLDAVARRAVTLAGADGCGIFEYSPDRGRFDAVVSQWISRRFLDTIPVAMNQGTLGRATQSGEPVQVADVQAVPDYPFRDRLVAEGLRAVLTVPMMGGDVARGIVLFRRTPGEFGERVVTLMRTLADQSKVAIANAHLFREIEEKGRLLEVANQHKSEFLANMSHELRTPLNAIIGFSEVLLQRMFGELNPKQDEYLQDVLSSGRHLLSLINDILDLSKVEAGRMELELARFDLPQALQDTLVLVRERAVRHGIDLHLDADARLGALVADERKIKQVMLNLLSNAVKFTPEGGRVEVRAVPTDGAVEISVADTGIGIAPENQELIFEEFRQVGGDYAHKREGTGLGLTLARKLVELHGGRLWVKSQVGQGSTFTFSVPERPWPAS*