ggKbase home page

PLM4_32_b1_sep16_scaffold_19923_2

Organism: PLM4_32_b1_sep16_Rokubacteria_71_14

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(1098..2495)

Top 3 Functional Annotations

Value Algorithm Source
Putative capsular polysaccharide synthesis protein (CpsA) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 465.0
  • Bit_score: 698
  • Evalue 3.50e-198
capsular polysaccharide synthesis protein (cpsA) similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 468.0
  • Bit_score: 486
  • Evalue 7.70e-135
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 467.0
  • Bit_score: 643
  • Evalue 1.40e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1398
GTGCTGAGGGCGTACTCCCGCCTGTTCGAGCAGCTCATGCTGGTGGCCGACCTGGTGCTGGTCGGGCTGTGCTGGCTCCTGGCCTACTGGCTGCGCTTCTACGTGGCGGGCCCGCCCTTGCCCTACGGGGACATGCCCCCGGTCGCCGACTACCTGCTGATGCTGCTGCCGATCCTGCTGGTGTGGAGCGTGTCCTTCCGCGCCTTCGGGCTCTACCGCCCGCGCCGCATCGGCTCCCACCTCTCCGAGGCCGTCGACATCGCCAAGGCCTCGACCATCGGGGTGCTCGTCCTGCTCGCGGTGATGACCTTCTTCTTCCGCGGCTACGACTACTCGCGCGTGGTCATCGTCTACTTCTGGCTGCTCTCCATCGGCGTCGTCTGGTTCTCCCGCGCCGCCTTCCGCGAGGGCCTCCGCTTCGCGCGGCGCCGCGGCTACAACCTGCGTTTCGCGGTGGTGGTAGGGGACGGCGAGCTGGCCGCCACCGTGGTGCAGCGCATGCAGGGCCGGCGTGACGTGGGCATCCAGGTCCTCGGGGTGGTGGGCGACGACAAGGACGACACCGGCGGAGCGCGCCGGCTCGGCGGCTACGCCGACCTGCGCGCGGTGCTCGACGCCCACACGGTGGACCACGTGATCCTGGCCCTGGCCCACGAGGACTACGGCCGGCTCGCCGGGCTGCTCGACGCGGTCGGCGACGAGCCGGTGACCATCCACGTGGTGCCCGACCTGCTGCGGTTCGCCTCCCTGCGTGGGGGCATCGAGCAGTTCGAGGGCATGCCGTTCATCCACCTGCGGGAGTCGCCGCTCTACGGGTGGAACCGGCTGGCCAAGCGCGTGTTCGACTTCGTCTTCTCGGCGACGGTGCTCGCCACCATCTGGCCGGTGCTGCTCCTGCTCGCCGCCGCGGTCAAGCTGAGCTCCCGCGGGCCCGTCTTCTACCGCCAGGAGCGCATGGGCCTGGACGGCCGGCGCTTCGAGATGCTCAAGTTCCGCACGATGGATGCGGACGCGGAGGCGCGGACCGGGCCGGTGTGGGCGCCCCCCGCCGACCAGCGGCGCACCAGCCTCGGCGCCTTCCTGCGGGGCCTGAGCCTCGACGAGCTGCCCCAGTTCTGGAACGTGCTGCGGGGCGACATGAGCGTGGTGGGACCGCGGCCGGAGCGGCCGGTGTTCGTGGAGCGGTTCCGCCGGACCGTGCCCGGCTACATGCTCCGGCACAAGGTCAAGTCGGGGATCACGGGCTGGGCGCAGGTGAACGGGCTCCGGGGCAACACGTCGCTCGAGAAGCGCATCCAGTACGACATCGAGTACATCGAGCGGTGGTCGGTGTGGCTCGACGTCAAGATCATCGCGATGACGGTGGTGCGGGTGCTGGTGGACCGGAACGCCTATTGA
PROTEIN sequence
Length: 466
VLRAYSRLFEQLMLVADLVLVGLCWLLAYWLRFYVAGPPLPYGDMPPVADYLLMLLPILLVWSVSFRAFGLYRPRRIGSHLSEAVDIAKASTIGVLVLLAVMTFFFRGYDYSRVVIVYFWLLSIGVVWFSRAAFREGLRFARRRGYNLRFAVVVGDGELAATVVQRMQGRRDVGIQVLGVVGDDKDDTGGARRLGGYADLRAVLDAHTVDHVILALAHEDYGRLAGLLDAVGDEPVTIHVVPDLLRFASLRGGIEQFEGMPFIHLRESPLYGWNRLAKRVFDFVFSATVLATIWPVLLLLAAAVKLSSRGPVFYRQERMGLDGRRFEMLKFRTMDADAEARTGPVWAPPADQRRTSLGAFLRGLSLDELPQFWNVLRGDMSVVGPRPERPVFVERFRRTVPGYMLRHKVKSGITGWAQVNGLRGNTSLEKRIQYDIEYIERWSVWLDVKIIAMTVVRVLVDRNAY*