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PLM4_32_b1_sep16_scaffold_6480_4

Organism: PLM4_32_b1_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(3204..3728)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator RfaH bin=GWA2_OP3_52_12 species=gamma proteobacterium IMCC3088 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 172.0
  • Bit_score: 244
  • Evalue 6.70e-62
putative RfaH family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 152.0
  • Bit_score: 104
  • Evalue 2.40e-20
Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 174.0
  • Bit_score: 235
  • Evalue 5.70e-59

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Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGAACGAGGAGTCTTTGCACATTGAACCCGGTCTTCGTTGGTATGCGATGCAGACGAAGGCCAACAAAGAGAAGGAAGTTGAAAAACGGCTTTCCGATCTCCGCATCGAAGTCTTTTTACCTTGGATGCGAACGCGGCGGAGAATTGGCAGCCGGTTTCACTGGGTTCTTGCTCCACTTTTTCCTGGTTATCTTTTTTGTCGGCTCGACCTCATAGAATCCGGAAAAGCAGCTCGCTACGCTCCGGGGGTTAGAGATTTTCTTAAGTTCGGCAATCACATTGCTGACGTTGGGGGCGAGATTGTTACGTCTTTGCGCGAGCGCTGCCCGGATGGCGTCGCCCAAATAGAATTGGTGTCGGCAAAGCCGGGGGATCCGGTCAAAATCAATGAGGGGCCCTTCTCCGGTCTCGAGGCGATCTTCGAGAAAAAAATGAAGGGCAGCGAGCGCGTCGCAGTTTTACTAGAGATCTTGGGTCGCCAAACCCGCATAGTCCTACCAAGCGAAACTATCGAAAAGATCTAG
PROTEIN sequence
Length: 175
MNEESLHIEPGLRWYAMQTKANKEKEVEKRLSDLRIEVFLPWMRTRRRIGSRFHWVLAPLFPGYLFCRLDLIESGKAARYAPGVRDFLKFGNHIADVGGEIVTSLRERCPDGVAQIELVSAKPGDPVKINEGPFSGLEAIFEKKMKGSERVAVLLEILGRQTRIVLPSETIEKI*