ggKbase home page

PLM4_32_b1_sep16_scaffold_19395_5

Organism: PLM4_32_b1_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(2150..2845)

Top 3 Functional Annotations

Value Algorithm Source
UPF0758 protein Pcar_0065 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 231.0
  • Bit_score: 360
  • Evalue 6.50e-97
DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 224.0
  • Bit_score: 286
  • Evalue 5.80e-75
Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 231.0
  • Bit_score: 360
  • Evalue 9.20e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAGTCGATACCCAACCAGCATCAAAGAATGGCCGGCGGAAGATCGGCCCAGAGAAAAACTGCTCGAGCATGGTGCCCAAGCTTTGACTGACACCGAGTTGCTGGCGATCATCCTTCGCGTTGGCAACGCCAGCACAGGCGAGAGTGCCATCGATCATGCTCGTCACCTGCTAAGCCAATTTGGGGGCTTGAAAGGAATTGAGGAAGCTTCAGTCAGCGAACTACGGAAAATCACAGGAATCGGGCCGGCGAAGGTCTCCCAGATCAAAGCCTGTTTGGAGATCGCCAAGCGCATCGGCAACCACAAGTGGGAAGTAGGCCAACCCCTGCGCTCATCCGAAGATGTGTTTCGGCATTTTCGCGAGAGCCTTGAAAAAGAGAAACGCGAGCTTTTCTACGTCGTGCTTCTAAACAACAAGAACCGGAAAATTCGTGAAGTCAAAATCTCCGAAGGTTCACTGACCGCGTCGCTGGTTCATCCACGGGAGGTCTACAACCCGGTGATCCGCGAATCAGCCGCTGCGGTCATATTCGTTCACAATCACCCCAGCGGCGACCCCGCTCCCAGCCAAGAAGACATCGAAATCACCCGAAGGCTCAAAGAAGTCGGCGAGGTCATGGGCATCCGAGTGCTCGACCATGTCGTGATCGGCCTCGAGCGTTACTACAGCTTCAGTGACAGAGGAATGCTCTAG
PROTEIN sequence
Length: 232
MSRYPTSIKEWPAEDRPREKLLEHGAQALTDTELLAIILRVGNASTGESAIDHARHLLSQFGGLKGIEEASVSELRKITGIGPAKVSQIKACLEIAKRIGNHKWEVGQPLRSSEDVFRHFRESLEKEKRELFYVVLLNNKNRKIREVKISEGSLTASLVHPREVYNPVIRESAAAVIFVHNHPSGDPAPSQEDIEITRRLKEVGEVMGIRVLDHVVIGLERYYSFSDRGML*