ggKbase home page

PLM4_32_b1_sep16_scaffold_5601_7

Organism: PLM4_32_b1_sep16_Acidobacteria_64_8

near complete RP 45 / 55 MC: 4 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: comp(5798..6577)

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 255.0
  • Bit_score: 352
  • Evalue 2.60e-94
2-dehydro-3-deoxyphosphooctonate aldolase similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 250.0
  • Bit_score: 314
  • Evalue 1.70e-83
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 256.0
  • Bit_score: 415
  • Evalue 3.50e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 780
GTGCAGTCAGTGACGCCCCTTGGACCGTGTGTCATCGAGAGCGAGGGACACGCGATCGAGACTGCCGTCGCGATCGCGGAGATCGCGAAGCGTGTCGGCGTGCCGGTCGTCTTCAAAGCGTCCTTCGACAAGGCCAATCGCACGTCGATCACTTCATATCGCGGCCCGGGTCTCCAGGAAGGCGTGCGCGTGCTCGGCAAGGTCAAAGAGCGCACCGGCCTGCCCATTCTCACCGACATACACGATGCGAGTCAGGCCGCGCCCGCCGCGAAGGTGGCCGACATCCTCCAGATCCCCGCGTTTCTGTCGCGGCAGACTGATCTCATCGTCGCCGCCGCGAAAACCGGACGCGTCGTCAACATCAAGAAGGGCCAGTTCCTCGCGCCGAAGGACATGAAACACGCGATCGCGAAGGTCACCGACAGCGGCAACACGAAAGTGATCGTGACCGAGCGCGGCGCCTCCTTCGGCTACAACAATCTCGTGGTCGATCCGCGATCCTTCCCGATGCTTCGCGCGCTCGGCTACCCCGTCGTCTTCGATGTCACGCACAGCCTGCAGCTGCCCGGGGCCGGCGACGGCGTCACTGCGGGCCTCGCCGAGTACCTCGAGCCGATGGCGCAGGCCGGCGTGGCCGCGGGCGTCGACGGCGTGTTCATGGAAGTGCACGAGGAACCCAGCCGCGCCAGGAGCGACGCTGCCAACGCGCTCAAGCTCGATCGCCTCGAGCCCCTCCTCCGCCGCCTGGTCGCCCTTGATAAGATCGTCCGCAATGCCTGA
PROTEIN sequence
Length: 260
VQSVTPLGPCVIESEGHAIETAVAIAEIAKRVGVPVVFKASFDKANRTSITSYRGPGLQEGVRVLGKVKERTGLPILTDIHDASQAAPAAKVADILQIPAFLSRQTDLIVAAAKTGRVVNIKKGQFLAPKDMKHAIAKVTDSGNTKVIVTERGASFGYNNLVVDPRSFPMLRALGYPVVFDVTHSLQLPGAGDGVTAGLAEYLEPMAQAGVAAGVDGVFMEVHEEPSRARSDAANALKLDRLEPLLRRLVALDKIVRNA*