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PLM4_32_b1_sep16_scaffold_7385_2

Organism: PLM4_32_b1_sep16_Acidobacteria_64_8

near complete RP 45 / 55 MC: 4 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: comp(1387..2799)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 489.0
  • Bit_score: 538
  • Evalue 4.70e-150
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 469.0
  • Bit_score: 490
  • Evalue 4.10e-136
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 470.0
  • Bit_score: 793
  • Evalue 8.60e-227

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
GTGAAGCCACGCATCCTGGTCATCGATGACGAGGAAGGTGTCCGCAAGTCGTTAAGGATGATCCTGGAGTATGACGGCTACGACGTGACCGAGGCGGCGACCGGCGAGGAAGGCGTCAAGCTGATCGAGCGCGAAGCGCCGGATCTCGTGTTCCTCGACATCAAGATGCCGGGGATGGACGGCCTCGAAGTCCTGCAGAAGGTGCGTCATCTTATTGAGGCGATGCCCGTGGTCGTGATCTCGGGTCACGGCGACATCAATACCGCGGTCGAAGCCACCAAGCTGGGCGCGTTTGATTTCATCGGCAAGCCGCCGGAGCGGGATCGGATCCTCGTTACCGTTCGCAATGCCGTCGACACGCGCCGGCTGAAGACCGAGAACAAGGGCTATCGCCGCGACGCCGAAAAGAAACACCAGATCGTCGGCGACTCACCCTCGCTGGCGGCGGTCCGCAGCGCGATTCAAAAGGCGGCCCCGACCAACGCCACCGTCCTGATCTGGGGCGAGAGCGGCGTCGGCAAGGAGCTGGTGGCGCGCGCGATCCATCGCGAGAGCCTCCGCCGCGACGGCCAGTTCGTGCAGGTCAATTGCGCCGCCATTCCCGACGAGCTGATCGAATCCGAATTGTTCGGTCACGAAAAGGGCTCGTTCACCGGCGCCACCGACCGGCAGATCGGCAAGTTCGAGCAGGCCGACAAGGGCACGATCTTCCTCGATGAAGTCGGCGACATGAGCCTCAAGACGCAGGCCAAGGTGCTGCGCGTGCTGCAGGAGCAGGAGCTCGAGCGGCTGGGCAGCAACAAGGTCATCAAGGTCGACGTCCGCGTCATCGCCGCGACCAACAAGAACCTCGAAGAGGAGATCGACAAGAACACGTTCCGCGAGGATCTGTTCTACCGGCTGAACGTCGTGCCGATTCACGTGCCGGCGCTGCGCGATCGCCGCGACGATATCCCGGCGCTGGTCCGCCATTTCGCCGACCTGTTCGCGCGCGACAACAACTTCCACCGCAAGACGTTCACCGCGCAGGCGATGGAGAAGTTGAAGCAGCAGCACTGGCGCGGCAACATCCGCGAGTTGCGCAACTTCGTCGAGCGGCTGGTGATTATGACGACCGGCGACTCGATCGACGCGAAGGACATTCCGGAGGGCGGCGTGATCCGCGGCGACCTGCCGATCCTGACCCCCGGTGGCGGCGGTGAGGTCGTCAGCGTGAGCGCATCCGAGCAGTCGTGGATGCAGGCGCCGACCCTGCAGGAATTCAAGTCAGGCTCGGAGCGCGCGTATCTCGTCTCGAAGCTGAGGGAGAATAGCTGGAACATCTCCAAGACAGCCGAGGTGATCGATACGCCACGGAGTAATCTGTATAAGAAGCTGGAGCAGTACCGCATCTCGCAGGAAACCGACGGTTAG
PROTEIN sequence
Length: 471
VKPRILVIDDEEGVRKSLRMILEYDGYDVTEAATGEEGVKLIEREAPDLVFLDIKMPGMDGLEVLQKVRHLIEAMPVVVISGHGDINTAVEATKLGAFDFIGKPPERDRILVTVRNAVDTRRLKTENKGYRRDAEKKHQIVGDSPSLAAVRSAIQKAAPTNATVLIWGESGVGKELVARAIHRESLRRDGQFVQVNCAAIPDELIESELFGHEKGSFTGATDRQIGKFEQADKGTIFLDEVGDMSLKTQAKVLRVLQEQELERLGSNKVIKVDVRVIAATNKNLEEEIDKNTFREDLFYRLNVVPIHVPALRDRRDDIPALVRHFADLFARDNNFHRKTFTAQAMEKLKQQHWRGNIRELRNFVERLVIMTTGDSIDAKDIPEGGVIRGDLPILTPGGGGEVVSVSASEQSWMQAPTLQEFKSGSERAYLVSKLRENSWNISKTAEVIDTPRSNLYKKLEQYRISQETDG*