ggKbase home page

PLM4_32_b1_sep16_scaffold_7385_6

Organism: PLM4_32_b1_sep16_Acidobacteria_64_8

near complete RP 45 / 55 MC: 4 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: comp(6007..7008)

Top 3 Functional Annotations

Value Algorithm Source
ispB; octaprenyl diphosphate synthase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] bin=CNBR_ACIDO species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 327.0
  • Bit_score: 404
  • Evalue 5.70e-110
trans-hexaprenyltranstransferase (EC:2.5.1.30) similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 313.0
  • Bit_score: 284
  • Evalue 3.20e-74
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 333.0
  • Bit_score: 595
  • Evalue 3.20e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
GTGTCTAACGCCGCGCCCCGGACCCAGGCGGATCTAATTCAGTTATTCGAGCCCGTCCGCGAGGATCTTGAGGCGGTCGAACGCGAGTTTGCGCGGCAGGTCCAGTCGCAAATCCACGTCATTCCGGAGATCGGCAACTACCTGCTGAAGAGCGGCGGCAAGCGCGTGCGTCCGGCGGTCTTGTTGATGAGCGCGCGCCTGTCCGGCTACACCGGTCCGCGCGCCGTGTTGAACGCGGCCGTGGTCGAGTTCATTCACACCGCGACCCTGGTTCACGACGACATCATCGACGATTCGGATGTGCGCCGCGGGCGGAAGGCCGTCCATTCGCAGTGGGGCAACGACGTCACGGTGCTCGCCGGCGATTTCCTCTACATCAAGTCGATGGCGATGGCGCTCACGCAGGACACCCTCGACATTGTCCGCATGCTCTGCGACGTCACGCTGCGCATGATCGAGGGCGAGATTTATCAGCTCACCAAGAACGGCGTCGTCGACCTGAGCGAAGACGAGCACTTCGACATCATCCGCCGCAAGACCGCGTACCTGTTTGGCGGGTGCGCGCAGATCGGCGGCATGCTCGGCGAGGTCGGACCGGAGAAAGAGCAGGCGCTCCGCGAGTACGGCTTCAGCCTCGGCATCATGTTCCAGCTCGTCGACGATCTCCTCGACTTCACCGGCGCCGCGGAAGCGCTCGGCAAGCCGATCGGCGGCGATCTCCGTGAAGGCAAGATCACCCTGCCGCTCATTCATCTCCTGAATCACGGCGGGCTCGAAGCGAGCGACCTGATTCGCAACGCGGTCCGCGATCGCGACATCACCCCCGAAAACTGGGCGCGCCTGAAGGCGCTGCTGCACGAGCACCGCTCGATCGAATACGCCTATAGCCGCGCCGTCGAATTCGGCGAGACGGCCAAGCGCCAGCTGCGACTCTTCCCGCCGAGCCAGGAACGCGAGGCCTTGATGGGCCTTGCTGATTACGTTCTCCTCAGAGACCGCTAG
PROTEIN sequence
Length: 334
VSNAAPRTQADLIQLFEPVREDLEAVEREFARQVQSQIHVIPEIGNYLLKSGGKRVRPAVLLMSARLSGYTGPRAVLNAAVVEFIHTATLVHDDIIDDSDVRRGRKAVHSQWGNDVTVLAGDFLYIKSMAMALTQDTLDIVRMLCDVTLRMIEGEIYQLTKNGVVDLSEDEHFDIIRRKTAYLFGGCAQIGGMLGEVGPEKEQALREYGFSLGIMFQLVDDLLDFTGAAEALGKPIGGDLREGKITLPLIHLLNHGGLEASDLIRNAVRDRDITPENWARLKALLHEHRSIEYAYSRAVEFGETAKRQLRLFPPSQEREALMGLADYVLLRDR*