ggKbase home page

PLM4_32_b1_sep16_scaffold_15551_2

Organism: PLM4_32_b1_sep16_Acidobacteria_64_8

near complete RP 45 / 55 MC: 4 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: 699..1439

Top 3 Functional Annotations

Value Algorithm Source
lipC; Spore germination lipase LipC (EC:3.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 209.0
  • Bit_score: 67
  • Evalue 5.90e-09
GDSL family lipase bin=CNBR_ACIDO species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 256.0
  • Bit_score: 125
  • Evalue 3.80e-26
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 256.0
  • Bit_score: 204
  • Evalue 1.50e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGCCCAAGCGAGTGCTGTTGGCCTTCGGCACCGCGGTGATCGCCGTTGCGTGCGGCGGCTCGCCGGCAGGGCCGACGACTGCCGGGGCGGTCAGCGCCGGCCGCACCGCGCGCCTGTCTCGCACGCGCTTCCTGGCGTTCGGCGACAGCCTCACCGCGGGCGAAGTGACGGCGCCGATCGGCGCCACTCCCGGACCGATTTCAAAACACATCATCGTGCCCGCGGCGTCGTATCCCTCGCAGCTGCAATCGCAGCTCGCATCACGCTACGCGTCGCAGGCGTCGGCGATTCGCGTGATCAACGCCGGGGTCCCCGGGGAAAACCTCTTCACCGCCGCACTGCGATTCGAGACCGCGCTGTCGGAGAACAGTCCCGAGGCCGTTATCATCATGCACGGCCTCAACAACCTTGGCGGTGACGGCACGGACGTGCCGACGAGCCTGATTCGCGGCATGGTGAGGACCGCGAAGGCGCAGAACCTGCCCGTCTTCGTCGGCTCGATGGTGCCGACCGTCGCCGGCCGCCTGCGATCGCAGAACGTGGCGCTGCTCGAGTCGTATAACGCGAAGCTGCGACAGATGTCGGTGGAGGAGGGCGCGGTGTTCGTCGATCTCTACACCACGTTGTTGCCCGAGGCACTGACCGTGATCGGCGTCGATGGCCTGCATCCGACCGAAGCCGGATACAGGCGCATCGCCGACGTGTTCTTCAACTCGATCTCAATCGAGCTCTCCGAATAA
PROTEIN sequence
Length: 247
MPKRVLLAFGTAVIAVACGGSPAGPTTAGAVSAGRTARLSRTRFLAFGDSLTAGEVTAPIGATPGPISKHIIVPAASYPSQLQSQLASRYASQASAIRVINAGVPGENLFTAALRFETALSENSPEAVIIMHGLNNLGGDGTDVPTSLIRGMVRTAKAQNLPVFVGSMVPTVAGRLRSQNVALLESYNAKLRQMSVEEGAVFVDLYTTLLPEALTVIGVDGLHPTEAGYRRIADVFFNSISIELSE*