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PLM4_32_b1_sep16_scaffold_47149_4

Organism: PLM4_32_b1_sep16_Acidobacteria_64_8

near complete RP 45 / 55 MC: 4 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: 1866..2423

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 164.0
  • Bit_score: 170
  • Evalue 1.30e-39
rluD; 23S rRNA synthase similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 169.0
  • Bit_score: 146
  • Evalue 5.70e-33
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 189.0
  • Bit_score: 305
  • Evalue 2.80e-80

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGTGATCGCCAAGAACGACGACGCGCACAAGGAGCTCGCGCGCCAGTTTCACGATCGCGAAGTCGAGAAGGAATACGTGGCGCTGACGTGGGGCCTGGTGCAGCAGCGCAAGCGCATCAACGCCGCGATCGGCCGCGATCCGAAGAACCGCGTGAAGATGTCGACGCGTGCCGGGCGCGCCCGCCACGCCGTGACGCGCGTGACGTGGTCGCGCGATCTGAAAGGCGTGACCCTCGTGCGAGTCGCGATCGCAACCGGACGCACGCACCAGATCCGCGTGCATCTCAGTGCGATCGGTCATCCGATTGTCGGCGACGCCCTCTACGGCGGCGTCCATCGCCGCGTGCCGCACCCACTGCGCGCCGTCACCAAGCTGACGCGCCCGTTCCTGCACGCCGAGCGATTGGTGTTCACGCACCCGCGGACCGGTGAGCGCCTGGAATTCACCGCGCCGCTGCCTGCCGATCTGGAAGCCGTGGTCGCGGAGCTGGTGCCACCGGATCAATTCGATGCGGTATTCGCCCGTCCTGCCGCCAAAGCCACTGAGGACGACTGA
PROTEIN sequence
Length: 186
MVIAKNDDAHKELARQFHDREVEKEYVALTWGLVQQRKRINAAIGRDPKNRVKMSTRAGRARHAVTRVTWSRDLKGVTLVRVAIATGRTHQIRVHLSAIGHPIVGDALYGGVHRRVPHPLRAVTKLTRPFLHAERLVFTHPRTGERLEFTAPLPADLEAVVAELVPPDQFDAVFARPAAKATEDD*