ggKbase home page

PLM4_65_coex_sep16_scaffold_5916_1

Organism: PLM4_65_coex_sep16_Chitinimonas_koreensis_64_7

near complete RP 47 / 55 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2..3316

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 1104.0
  • Bit_score: 1822
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta Tax=Aromatoleum aromaticum (strain EbN1) RepID=RPOB_AROAE similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 1104.0
  • Bit_score: 1822
  • Evalue 0.0
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 1116.0
  • Bit_score: 1933
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3315
ATTACCGTCAAGCACATCCGCGACATAGAAGCTGCCGGAATGAAGCGGATGGCCGTGCCCGACGACTTCGTGATCGGGCGGACGCTCGCGCACAGCGTCGTCAACAGGGAAACCGGCGAGATTCTGGCCAACGCCAACGACGAGGTCACCGATACGCTGCTTGCGAAACTTCGCGAAGCGGGTGTCGAGGCGATCAAGACCATCTACACCAACGATCTCGACCAGGGGGGGTACATCTCGCAGACCCTGCGAATCGACGAGACCGCTGAGCAGACTGCGGCGCGCGTTGCCATCTACCGCATGATGCGTCCCGGCGAGCCGCCCACGCAGGACGCGGTCGAGACGTTGTTTAAAGGCTTGTTCTATTCGGAAGAGCGCTACGACCTTTCGGCCGTCGGCCGCATGAAGTTCAACCGCCGCGCCTATCCCGAGAAGATCGAGGAAAAGACCCCGGGCTGGCTGCGCAGGTTCTACCAGCGCTGCGGCTCGCACGGAGCCGAAGGGGCGGGAACGCTCTCGAACGACGACATCCTTGCCGTTGTGGGAATCTTGGTCGAGCTGCGCAACGGCCGCGGCGAGATCGACGATATCGACCATCTCGGCAACCGGCGCGTGCGCTCCGTGGGCGAGCTCGCCGAGAACCAGTTCCGCGCAGGACTAGTCCGGGTCGAGCGGGCGGTCAAGGAACGCCTGTCGCAGGCGGAGTCGGACAACCTCATGCCGCACGACCTGATCAACGCAAAACCGATTTCGGCGGCGATCAAGGAGTTCTTCGGCTCCTCGCAATTGTCGCAGTTCATGGATCAGACTAATCCGCTCTCCGAGATCACCCACAAGCGGCGCGTCTCCGCGCTCGGACCCGGGGGGCTCACGCGCGAGCGCGCGGGGTTCGAGGTGCGCGACGTTCACCCCACGCATTACGGCCGTGTGTGCCCGATCGAGACGCCGGAAGGTCCGAACATCGGCCTGATCAATTCGCTCGCGCTCTACGCCCGCACCAACAGGTACGGGTTCCTGGAGACGCCCTACCGCAAGGTGGTGAACAGCAAGGTCGCCAACGAAATCGACTTCCTCTCGGCGATCGAGGAAGGCAACTTCGTCATCGCCCAGGCGAACGCGCAGATCGACAAGAACGGCAAGCTGGTTGACGGCCTGGTGTCCTGCCGCTTCAAAAACGAGTTCAACCTGGCAACCGCCGACCGGGTGCAGTACATGGACGTCGCGCCCGCGCAGATTGTATCGGTTGCGGCCTCGCTCATCCCGTTCCTCGAGCATGACGATGCCAATCGCGCGTTGATGGGCTCCAACATGCAGCGCCAGGCCGTGCCTTGCCTGCGTCCGGAAAAGCCCCTCGTCGGCACGGGAATCGAGCGCACCGTTGCGGTGGACTCGGGCACCGCCGTGCAGGCGCTGCGCGGCGGCATAGTGGATTACGTCGACGCGAGCAGGATCGTGGTGCGCGTGAACGACGACGAGACGGTTCCAGGCGATGTAGGCGTGGACATCTACAACCTGGTGAAGTACACCCGTTCCAATCAGAATACCAATATCAACCAGACGCCCCTCGTTAAACCGGGCGAGCGCATCTCCAAGGGCGATGTCGTCGCCGACGGCGCCTCGACCGATATGGGCGAGTTGGCGCTCGGGCAGAACATGCTGGTCGCGTTCATGCCCTGGAACGGGTTCAATTTCGAGGACTCGATCCTGATCTCCGAGCGCGTCGTCGCGGACGAGCGCTATACCTCGATCCACATCGAGGAGTTGACGGTCGTCGCCCGGGACACCAAGCTCGGGCCCGAAGAAATCACGCGGGATATTTCGAACCTGTCTGAAGCACAGCTCGCGCGTCTCGACGAATCCGGGATCGTCTACATCGGAGCGGAAGTCGAGGCGGGCGACGTGCTGGTGGGCAAGGTCACGCCCAAGGGCGAGACGCAGCTCACTCCCGAGGAGAAACTGTTGCGCGCGATCTTCGGCGAGAAGGCTTCCGACGTGAAGGACACGAGCTTGCGCGTGCCCTCCGGGATATCCGGCACGGTGATCGACGTGCAGGTGTTTACGCGGGAAGGAATCGAGCGCGACAAGCGCGCCCAAGAGATCATCGACGAGGAGCTGAAGCGCTACAAGAAGGACCTTGCCGACCAGATGCGCATCGTCGAGACCGACGCTTTCGAGCGTATCGAGCGTCTGCTGATCGGCAAGACCGCCAACAAGGGGCCCAAGAAACTCTCGCGCGGAACCAAGATCACCAAGTCCTACCTGGAAGGCGTCGAACGCCACGACTGGTTCGAGGTGAGCCTTGCGAATGAGGATGCCGCGCAGCAGCTGGAAAACCTGAAGGAAAGTCTCGCGCAGACGCGGGTGAGGTTCGACGCCGCGTTTGAGGCGAAGAAGAAGAAACTTACCCAGGGCGACGAGCTGCCGCCCGGCGTGCAGAAGATGGTGAAGGTCTACGTCGCGGTCAAGCGGCGCCTGCAGCCCGGCGACAAGATGGCCGGCCGCCACGGGAACAAGGGCGTGATCTCCAAGATCGTGCCGGTGGAGGATATGCCCTCCATGGCCGACGGCACCCCTGTGGACATCGTGCTCAATCCCTTGGGCGTGCCGTCGCGCATGAACGTCGGCCAGATACTGGAGACCCATCTCGGCTGGGCGGCGAAAGGACTGGGAGTCAAGATCGGCGAGATGCTGAAGGCCAACGCCAAAAGCGCTGAGGTGCGCAAGTTCCTGAACCGAATCTACGGCCAGGGCGGCAAGCCCGAGGATCTGAGCGGGCTCTCCGACGAGGATGTGATCACGCTCGCGCACAACCTCAGGCAAGGGGTGCCATTCGCGACCCCGGTCTTCGACGGCGCCTCCGAGAGCGAGATCAAGGAAATGCTCGATGTGGCGGGGCTGCCGCGCGGGGGGCAGGTGACCTTGCACGACGGACGAACCGGCGACCCCTTCGACCGGCAGGTGACGGTGGGCTTCATGCACGTGTTGAAGCTGCACCATCTGGTCGACGACAAGATGCATGCGCGTTCCACGGGGCCGTACAGCCTGGTTACGCAGCAGCCTCTCGGGGGCAAGGCGCAGTTCGGCGGACAGCGCTTCGGAGAGATGGAAGTCTGGGCGCTCGAAGCCTACGGCGCCGCGTACACGCTTCAGGAGATGCTCACGGTCAAGTCCGATGACATCAACGGCCGCACCAAGGTGTACGAAAACATCGTCAAGGGCGACCACAAAATCGACGCGGGGATGCCGGAATCGTTCAATGTGCTGGTGAAGGAAATACGGTCGTTGGGCATCGACATCGACCTGGAGCGGTTTTGA
PROTEIN sequence
Length: 1105
ITVKHIRDIEAAGMKRMAVPDDFVIGRTLAHSVVNRETGEILANANDEVTDTLLAKLREAGVEAIKTIYTNDLDQGGYISQTLRIDETAEQTAARVAIYRMMRPGEPPTQDAVETLFKGLFYSEERYDLSAVGRMKFNRRAYPEKIEEKTPGWLRRFYQRCGSHGAEGAGTLSNDDILAVVGILVELRNGRGEIDDIDHLGNRRVRSVGELAENQFRAGLVRVERAVKERLSQAESDNLMPHDLINAKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARTNRYGFLETPYRKVVNSKVANEIDFLSAIEEGNFVIAQANAQIDKNGKLVDGLVSCRFKNEFNLATADRVQYMDVAPAQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPLVGTGIERTVAVDSGTAVQALRGGIVDYVDASRIVVRVNDDETVPGDVGVDIYNLVKYTRSNQNTNINQTPLVKPGERISKGDVVADGASTDMGELALGQNMLVAFMPWNGFNFEDSILISERVVADERYTSIHIEELTVVARDTKLGPEEITRDISNLSEAQLARLDESGIVYIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGISGTVIDVQVFTREGIERDKRAQEIIDEELKRYKKDLADQMRIVETDAFERIERLLIGKTANKGPKKLSRGTKITKSYLEGVERHDWFEVSLANEDAAQQLENLKESLAQTRVRFDAAFEAKKKKLTQGDELPPGVQKMVKVYVAVKRRLQPGDKMAGRHGNKGVISKIVPVEDMPSMADGTPVDIVLNPLGVPSRMNVGQILETHLGWAAKGLGVKIGEMLKANAKSAEVRKFLNRIYGQGGKPEDLSGLSDEDVITLAHNLRQGVPFATPVFDGASESEIKEMLDVAGLPRGGQVTLHDGRTGDPFDRQVTVGFMHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDINGRTKVYENIVKGDHKIDAGMPESFNVLVKEIRSLGIDIDLERF*