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PLM4_65_coex_sep16_scaffold_18518_1

Organism: PLM4_65_coex_sep16_Chitinimonas_koreensis_64_7

near complete RP 47 / 55 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 1..402

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 128.0
  • Bit_score: 124
  • Evalue 8.30e-26
hypothetical protein, partial Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036AA309 similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 128.0
  • Bit_score: 131
  • Evalue 4.90e-28
tRNA pseudouridine 55 synthase similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 127.0
  • Bit_score: 118
  • Evalue 9.20e-25

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Taxonomy

Candidatus Accumulibacter sp. BA-94 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
GCGGCGGTGCTATTCGTCGAATGCAGCAAGGGCACCTACATTCGAGCGCTTGCCGAGGATATCGGCGAGGCGCTCGGTTGCGGCGCACATCTGACAGCGCTCGAGCGCACTGCCGTCGGCCCGTTCCGGCTGGACCAGTCGCTCAAGCTGGATGTCCTCGAAGCGCTTTCCCTCCCTGAACGGCGCGGCAGGCTTCTGCCGCCGGAAGCGCTCGTTGAATCCCGGCCGCGCCTCATGCTTGAGGTCCAGGTGGCGGCGAAATTTCGGCAAGGTCGGGCGGTTCCAGTCGATTCCCCGAGCGGCAGCGCCGCAGTCTTTGACGAAGGCGGGATATTCCTCGGTACCGGGGAGGTCGATGCGAGCGGCACGCTCCGGCCGAAGCGTCTCCTCGCGCTGCGATAG
PROTEIN sequence
Length: 134
AAVLFVECSKGTYIRALAEDIGEALGCGAHLTALERTAVGPFRLDQSLKLDVLEALSLPERRGRLLPPEALVESRPRLMLEVQVAAKFRQGRAVPVDSPSGSAAVFDEGGIFLGTGEVDASGTLRPKRLLALR*