ggKbase home page

PLM4_65_coex_sep16_scaffold_8634_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_54_17

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3..890)

Top 3 Functional Annotations

Value Algorithm Source
hemC; porphobilinogen deaminase (EC:2.5.1.61) similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 296.0
  • Bit_score: 511
  • Evalue 1.40e-142
Porphobilinogen deaminase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000255|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000255|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=HMBS {ECO:0000255|HAMAP-Rule:MF_00260};; Pre-uroporphyrinogen synthase {ECO:0000255|HAMAP-Rule:MF_00260}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 296.0
  • Bit_score: 511
  • Evalue 7.00e-142
Porphobilinogen deaminase Tax=Geobacter uraniireducens (strain Rf4) RepID=HEM3_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 296.0
  • Bit_score: 511
  • Evalue 5.00e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCCGTTGAAAGCAATGAGAATAGGCACCCGCGCCAGCCAGCTGGCGCTCTGGCAGGCCAACTGGGTGAAGTCCGAACTGGAAAAGCGTTATCCGGGGATGGAAGTGACCCTGGTGAAGATCAAGACCATTGGCGACAAGATTCTCGACGTGCCGCTGGCCCAGGTGGGAGGGAAGGGGCTGTTCGTCAAGGAGATAGAAGAGGCAATGCTGCGCGGTGAGATCGATATCGCGGTGCACAGCATGAAGGACGTCCCCACCGAGTTCCCCGAAGGGCTGGGACTCCACTGCATCACCGAGCGGGAGGACCCGCGCGACGCCGTCATATCACGCGGGGTAAAGTTCGCTGATCTCCCCTTGGGAGCGCGTATCGGCACCTCGGCCCTGAGGCGCCAGGCCCAGCTTCTCAAGCTCCGCCCCGACCTGCAGATGGTCATAATTCGCGGCAACGTGGAGACCCGCATAAGCAAACTTGAAACGGAAAAGCTCGATGCGGTGATACTAGCCGCGGCGGGCCTGAAGCGTCTCGGCTTTACCGATCAGGTGGCCGAGTACCTCCCAATCGACATCTCCATCCCCGCCATCGGCCAGGGGGCGCTCGGGATCGAGTGCCGCCTCGATAACGAGGCGATCAAGGAGACCATCGCATTCTTCAACCACCCGGACACCGCCCATGCGGTGCGCGCCGAAAGGGCGCTCCTCTGGCGCTGCGAAGGTGGGTGTCAGGTCCCCATTGCAGCCCATGGCGTGGTCAACGGAAACGAACTGACGCTGACCGGCTTCGTTGCCTCTGTTGACGGCAGCCGCTCGGTCAAGGCGAGCATCTCCGGTCCGGCCGGGGAAGGGGAAAAACTGGGAATCGCCCTGGCGGAACAGCTCCTCAAGGAT
PROTEIN sequence
Length: 296
MPLKAMRIGTRASQLALWQANWVKSELEKRYPGMEVTLVKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGVKFADLPLGARIGTSALRRQAQLLKLRPDLQMVIIRGNVETRISKLETEKLDAVILAAAGLKRLGFTDQVAEYLPIDISIPAIGQGALGIECRLDNEAIKETIAFFNHPDTAHAVRAERALLWRCEGGCQVPIAAHGVVNGNELTLTGFVASVDGSRSVKASISGPAGEGEKLGIALAEQLLKD