ggKbase home page

PLM4_65_coex_sep16_scaffold_14374_3

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_54_17

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1272..1580

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 91.0
  • Bit_score: 104
  • Evalue 6.80e-20
Phosphomethylpyrimidine synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G958_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 91.0
  • Bit_score: 101
  • Evalue 4.10e-19
thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 91.0
  • Bit_score: 101
  • Evalue 1.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter soli → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGGAAACAGAGATTGAACAGGCCCGCGCGGGGGTCATCACCGGCCGGATGGCGGAGGTTGCGGTCGGGGAGGAACTCCGCCCGGAGTATATACGTAAGATGGTGGCGGAGGGAAAAATCGTCATCCCGGGAAATCACAACCGCCTGACAAAAGCGGTCGGCATCGGCAAGGGGCTGCGGACAAAGGTGAACGCCTCCATCGGCACATCACGGGGCCGAGGTGAGGAAGGCAAGGGCGGCCGCCGAGTCCGGGGCGGACACCCTCATGGAGCTTTCGGCCGGCGGGGACCTGGACAGGATCAGGCGTGA
PROTEIN sequence
Length: 103
METEIEQARAGVITGRMAEVAVGEELRPEYIRKMVAEGKIVIPGNHNRLTKAVGIGKGLRTKVNASIGTSRGRGEEGKGGRRVRGGHPHGAFGRRGPGQDQA*