ggKbase home page

PLM4_65_coex_sep16_scaffold_22960_4

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: comp(2126..3508)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate enzyme bin=GWF2_Methylomirabilis_70_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 460.0
  • Bit_score: 716
  • Evalue 1.20e-203
thiamine pyrophosphate enzyme similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 460.0
  • Bit_score: 651
  • Evalue 1.00e-184
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 460.0
  • Bit_score: 783
  • Evalue 1.50e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1383
TTCGGCGACTCGGTGCCGATCGTCGTGCTCCCGGGCGGCTATCCGCGCAAGCTCCTCAACATCACGCCGAACTTCTCCGCGCTCCTCAATTTCCAGCACGTCACCAAGTGGTGCGAGCAGGTCATCCTGCCGGAGTCGGTGCCCGATGCCATGCGGCGCGCCTTCACTCAGGTGCGGAACGGCCGGCCGCGACCGGTGCTCGTCGAGATCCCCGTCGACGTCATGCGCGCGGAGGTGCCCGACGACTTCGCCTACACGCCGGTGCCGCGGCTGCGCATGGGGCCCGATCCACGGGCCGTCACCGAGGTGGCCGCGGCGCTCGTCGCCGCCAACCGGCTGGTGATCTACGCCGGCCAGGGCGTGCACTACGCGCGCGCGTGGAAGCAGCTGCGCGAGCTGGCCGAGCTGCTGGAGGCGCCGGTCACCACGAGCCTGCAGGGCAAGAGCGCGTTCCCGGAGACGCATCCCCTGTCGCTCGGCTCGGGCGGGCGCTCGATCAGCAAGCAGCTCCACCACTTCCTGAACAACGCCGACCTCATCTTCGGCATCGGCTGCAGCTTCGCCACGACCAACTACGGCGTGGCCATGCCGAAGGGCAAGCGCATCGCCCACGCCACCCTCGACCCGCTCGATATCAACAAGGACATCGTGGCCGACCTCGCGGTGGCCGGCGACGCCGGGCTGACGCTCGACGCGCTGCTGGCCGAGGTGAAGGACCGGCTCAAGGGCAAGCCGCGGGGCCGTCTGGCCGCGGTCACCCAGGAGATCGCCGGGCTCAAGCAGGAGTGGCTGGCCCAGTGGATGCCGCGGCTGACGCAGAAGACGTCGCCGCTGTCGCCCTACCGCGTGCTGTGGGACCTGATGCACACGGTTGACGTCGCCAACACGATCATCACCCACGACGCCGGCAGCCCGCGGGATCAGATCTCGCCGTTCTGGGAGCCGACCGAGCCGCTGAGCTACATCGGCTGGGGCAAGACGACCCAGCTCGGCTACGGCCTCGGCCTCGCCATGGGCGCCAAGCTGGCCCAGCCCGACAAGCTGTGTGTCAACGTGTGGGGCGACGCCGCCATCGGCTTCACCGGCATGGACTTCGAGACGGCGGTGCGCGAGCGCATCCCGATCCTGTCGGTGCTGCTCAACAACTTCTCGATGGCCATCGAGTTGAAGGTCATGAAGACCGCGACCCAGAAGTACCGCTCGACGGACATCAGCGGCAACTACGCGGACTTCGCCAAGGCACTGGGCGGCCACGGCGAGCGCATCACCGAGCCCGACGACATCATCCCGGCCATCCGCCGCGCGGTCGCCAAGACGCGCGAGGGCACGCCGGCCCTGCTGGAGTTCATCACCGAGAAGGCCGAAGATTTCTCGATGTTCTGA
PROTEIN sequence
Length: 461
FGDSVPIVVLPGGYPRKLLNITPNFSALLNFQHVTKWCEQVILPESVPDAMRRAFTQVRNGRPRPVLVEIPVDVMRAEVPDDFAYTPVPRLRMGPDPRAVTEVAAALVAANRLVIYAGQGVHYARAWKQLRELAELLEAPVTTSLQGKSAFPETHPLSLGSGGRSISKQLHHFLNNADLIFGIGCSFATTNYGVAMPKGKRIAHATLDPLDINKDIVADLAVAGDAGLTLDALLAEVKDRLKGKPRGRLAAVTQEIAGLKQEWLAQWMPRLTQKTSPLSPYRVLWDLMHTVDVANTIITHDAGSPRDQISPFWEPTEPLSYIGWGKTTQLGYGLGLAMGAKLAQPDKLCVNVWGDAAIGFTGMDFETAVRERIPILSVLLNNFSMAIELKVMKTATQKYRSTDISGNYADFAKALGGHGERITEPDDIIPAIRRAVAKTREGTPALLEFITEKAEDFSMF*