ggKbase home page

PLM4_65_coex_sep16_scaffold_23600_1

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: 3..1874

Top 3 Functional Annotations

Value Algorithm Source
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 631.0
  • Bit_score: 742
  • Evalue 8.00e-212
DNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHF2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 631.0
  • Bit_score: 742
  • Evalue 2.80e-211
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 617.0
  • Bit_score: 901
  • Evalue 5.10e-259

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1872
GAGTTCCCCGAACTCGTCACGCCGGACAGTCCGACCCAGCGCGTGGGGGGGACGCCGATCGAGGCGTTTCAGTCGGTCCAGCATCGGGTGGCGATGCTGTCGCTGGACAACGCGACCACGCCCGAGGATGTCCGCGAGTTCGAGGCGCGCATCACGCGCGCCCTGCCCGGCCAGCGCTTCACGTACGTGTGCGAGCCGAAGATCGACGGGCTGGGGGTGGCGCTGCTCTACGCGCGCGGCCGCTTCGTGCGTGGCGCGACCCGCGGTGACGGGCGCGTCGGCGAGGACATCAGCGCCAATCTCCGGACGATCGGCAGCCTGCCGCTGCGGCTGAAGGCCGGCCCCCTGGCCGAGGCGGAGGAGCTCGAGGTGCGCGGCGAGGTCTACATGCCGCGCGCGGACTTCGAGCGGCTGAACCGCGGGCTCGAGGAAGCCGGCGAGGCCACGTTCGCCAACCCGCGCAACGCCGCCGCCGGCGCCGTGCGGCAGAAGGACCCCGCCGTCACCAAGCGGCGCCCGCTCGACGCGTTTCTCTATCACGTGTCGTGGGCGCCGGGGCTGGCGGTCGCCGGCCACTGGCAGGCGCTGGAGGCGCTGCGGGCGACCGGCTTCCGGACGAACCCGCGCTCGGTGCGCTGCGAGTCCATCGACGAGGTCATCGCGGCCTGCGCGGCGCTGGAGGCCGAGCGCGACGGGCTCGGCTACGACGCCGACGGCGTGGTGGTCAAGGTCGACGCGCTCGAGCTGCAGCGGCGGCTCGGCTCCACGACGCACCACCCGCGCTGGGCCATCGCCTTCAAGTTCACCGCCCGGCAGGCCACGACCCTCGTGCAGGCGATCGAGGTCAACGTCGGCAAGACCGGCGCGCTGACGCCGGTGGCCAAGCTGGCGCCGGTGCCGCTGGCGGGCGTGGTCATCAGCAACGTGAGCCTGCACAACGAGGACGAGCTGCGGCGCAAGGACGTGCGGGTCGGCGACACCGTGCTGATCGAGCGCGCGGGTGACGTCATCCCCTACGTCGTGCAGGTCGTGCCCTCCAAGCGGCCACCGGAAGCCGTCGAGTTCGCGTTCCCCGACCGCTGCCCCGCCTGCGGCGGTGTCGCCTTCCGGCCCGAGGGCGAGGCGTACTGGCGCTGCATGAACGCCGCCTGCCCGGCCCAGCTCAAGGAGCGGCTCAAGCACTTCGGCTCGCGGCGCGCGATGGACATCGAGCACCTCGGCGACGCCGTCGTCGAGCAGCTCGTCGACCGCGGACTCGTGAAGGACTTCGCCGACCTCTACCGGCTCACCGTCCCCCAGCTCGCCGAGCTCGAGCGCCTTGCCGAGAAGTCGGCGCAGAACCTTGCCGCCGCCATCGAGGGATCGAGGGGCCGCGGGCTCGCGCGCCTGCTGAACGCGCTGGGCATCCGCATGGTCGGCGAGCGGGTGGCGCGCGTGCTGGCGATGCGCTTCGGCGACCTCCCGCGGCTGATCGCGGCCTCCGAGGCGACGCTGGCCGAGACCCACGGCATCGGCCCCACCATCGCCGCGTCGGTCCGGAAGTTCTTCGACGACGAGTCGAACCGGCGGATCCTCGACGACCTCGGCCGGCTCGGCGTGGATCTGACCGAGCGCACGGCGACGGCCGACGGGCCGAAGCCGCTGGCGGGCAAGACCCTGGTCATCACGGGCACCCTGGCCTCGCTGAGCCGCGAGGGCGCCCGAGAGCTGGTCGAGGCCCTGGGCGGCCGCGTGACCTCGTCGGTCACGCGCAAGACCGACTACGTCGTGGCGGGCGAGGCGCCGGGCGGCAAGGCCGACGACGCGCGACGGCTCGGCGTGACCGTGCTCGACGAAGCGGCTTTCCTCGACCTCACCGCTCGGGCATCATAG
PROTEIN sequence
Length: 624
EFPELVTPDSPTQRVGGTPIEAFQSVQHRVAMLSLDNATTPEDVREFEARITRALPGQRFTYVCEPKIDGLGVALLYARGRFVRGATRGDGRVGEDISANLRTIGSLPLRLKAGPLAEAEELEVRGEVYMPRADFERLNRGLEEAGEATFANPRNAAAGAVRQKDPAVTKRRPLDAFLYHVSWAPGLAVAGHWQALEALRATGFRTNPRSVRCESIDEVIAACAALEAERDGLGYDADGVVVKVDALELQRRLGSTTHHPRWAIAFKFTARQATTLVQAIEVNVGKTGALTPVAKLAPVPLAGVVISNVSLHNEDELRRKDVRVGDTVLIERAGDVIPYVVQVVPSKRPPEAVEFAFPDRCPACGGVAFRPEGEAYWRCMNAACPAQLKERLKHFGSRRAMDIEHLGDAVVEQLVDRGLVKDFADLYRLTVPQLAELERLAEKSAQNLAAAIEGSRGRGLARLLNALGIRMVGERVARVLAMRFGDLPRLIAASEATLAETHGIGPTIAASVRKFFDDESNRRILDDLGRLGVDLTERTATADGPKPLAGKTLVITGTLASLSREGARELVEALGGRVTSSVTRKTDYVVAGEAPGGKADDARRLGVTVLDEAAFLDLTARAS*