ggKbase home page

PLM4_65_coex_sep16_scaffold_27406_4

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: 2591..2893

Top 3 Functional Annotations

Value Algorithm Source
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 92.0
  • Bit_score: 119
  • Evalue 5.40e-25
Tryptophan synthase alpha chain bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 91.0
  • Bit_score: 134
  • Evalue 4.40e-29
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 92.0
  • Bit_score: 139
  • Evalue 1.50e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGAGAGCGCCGCCACCCGCGCCAACCTCCCGCATCGGGGCGACGTTCGAGCGGTTGCGCGGGCGGGGCGAGCGAGCCCTGGTGGCCTATCTCATGGCCGGCGATCCCTCGCTGGCCGCGACGGAGCGGCTGGTGATCGAGGCCGAGCGGCGCGGCGCCGACGTGATCGAGCTCGGCGTGCCGTTCTCGGATCCGCTCGCCGACGGCCCCGTGATCCAGCGGGCCGGCGTGCGCGCGCTGGCCGCGGGCACGAGCCTGCCGCGCGTGCTGGAGATGGTCGCCACGCTGCGGGCGCGGGTCCGG
PROTEIN sequence
Length: 101
MRAPPPAPTSRIGATFERLRGRGERALVAYLMAGDPSLAATERLVIEAERRGADVIELGVPFSDPLADGPVIQRAGVRALAAGTSLPRVLEMVATLRARVR