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PLM4_65_coex_sep16_scaffold_34745_3

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: comp(2051..2521)

Top 3 Functional Annotations

Value Algorithm Source
Putative Efflux transporter, RND family, MFP subunit bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 162.0
  • Bit_score: 164
  • Evalue 4.60e-38
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 155.0
  • Bit_score: 105
  • Evalue 1.20e-20
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 162.0
  • Bit_score: 174
  • Evalue 1.10e-40

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 471
GGCGGGCGCCAGTCGCCCGAGCAGATCCGCGAGCGGCTCGTGACGGGGCTCGGGCTCAGCGGGGAGCAGCAGAAGAAGCTCGATCCGATCCTGGCCGACGGCCGCCAGCAGATGATGGCGCTGCAGGGGCTGCCCGATCAGGAGCGCCAGGCCCAGGCCCGCAAGATCCGCGAGGCTAGCCGCGTGCGCATCCGCGAGATCCTCACGCCCGAGCAGCGCGCGAAGTACGACGAGTCGACCGGCGGCGAGGCGCGCGGCGGTGGCGATCCGCGCAGCGGCGCGCCGGGCCGGGTGTGGGTGCTCGACGGGGACAAGGTCAAGCCGATCGCGCTCACGCTCGGCATCAGCGACGGCGCGGCCACCGAGGTGCTCCGCGGCGAGCTGAAAGAGGGTCAGGAGATCATCGTCGGCGCAGCCGGGTCGGGCAAGCCCGCCTCGGGCAGCGGCGCCGCGCCGAGGCTGCGGCTCTAG
PROTEIN sequence
Length: 157
GGRQSPEQIRERLVTGLGLSGEQQKKLDPILADGRQQMMALQGLPDQERQAQARKIREASRVRIREILTPEQRAKYDESTGGEARGGGDPRSGAPGRVWVLDGDKVKPIALTLGISDGAATEVLRGELKEGQEIIVGAAGSGKPASGSGAAPRLRL*