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PLM4_65_coex_sep16_scaffold_19220_1

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: comp(157..528)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein bin=GWF2_Nitrospirae_44_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 123.0
  • Bit_score: 142
  • Evalue 2.50e-31
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 117.0
  • Bit_score: 105
  • Evalue 9.70e-21
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 123.0
  • Bit_score: 157
  • Evalue 8.20e-36

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Taxonomy

RLO_RIF03_38_15 → RIF3 → Bacteria

Sequences

DNA sequence
Length: 372
ATGTCCAAGGCCGCATTCGGCGCGTTCTTCAAGGAGCTGCGCATCGGCCAGAAGGTGACGCTCCGGCAGTTCTGTCAGGGCCACGGGTATGATCCGGGGAACATCAGCAAACTGGAACGTGGACTGCTCCCCCCACCCGACTCCGAGGCGAAGCTCGCGGAGTTCGCCAAGGCCCTGAAGATCCGGCGGGGGAGCGACGCCTGGTATCAGTTCTTCGACTTGGCGCGGGCCGCCCGGGGGAAGCTCCCCCCTGACGTTCTGCGCAAGCGCGATGTGGTGGCGCGGCTGCCGCTGCTCTTCCGGACCCTCCGGGGTCAGAAGGTCTCCGAGCAGAAGCTCAACGAGCTGATCGACTTGATCCGGCGGGCATAG
PROTEIN sequence
Length: 124
MSKAAFGAFFKELRIGQKVTLRQFCQGHGYDPGNISKLERGLLPPPDSEAKLAEFAKALKIRRGSDAWYQFFDLARAARGKLPPDVLRKRDVVARLPLLFRTLRGQKVSEQKLNELIDLIRRA*