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PLM4_65_coex_sep16_scaffold_39360_2

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: comp(1272..1700)

Top 3 Functional Annotations

Value Algorithm Source
Winged helix-turn-helix transcriptional regulator, Rrf2 family bin=GWA2_OP3_52_12 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 132.0
  • Bit_score: 157
  • Evalue 5.20e-36
Rrf2 family winged helix-turn-helix transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 135.0
  • Bit_score: 151
  • Evalue 1.40e-34
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 142.0
  • Bit_score: 236
  • Evalue 1.60e-59

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Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 429
ATGAAGCTCACGCGTGGGGGTGAATACGGTATCCGGGGAGTGCTCTATCTCGCCCAGCAGGACAACGGCAAGGTCAGCATGCTTTCGGCCATCGCCAAGGCGCAGGATGTTCCGCCCCGCTTCCTGGCCAAGATCTTTCAGGCGCTGGCGAAGGCGGGTATTGTCAAATCGCACCGAGGCGCCAAGGGCGGCTTCTCCCTTGCCCGTATGCCAGCCGATGTCACGATGAAGAACGTGATCGAGGCCATCGAGGGACCCATCTTCTTGAATGTGTGTTTGATGAGCCCGGGCGAATGCAACCGCGACAAGATCTGTCCCATGCACACCGTCTGGGAAGAGGCCCAGGAGAAAATGATGGAGGTCCTGGACCGGGCCAACTTCGCAGAACTGGCCAAGGCCGAGCGCCAGGCCCAACTCACGATTGCCTAG
PROTEIN sequence
Length: 143
MKLTRGGEYGIRGVLYLAQQDNGKVSMLSAIAKAQDVPPRFLAKIFQALAKAGIVKSHRGAKGGFSLARMPADVTMKNVIEAIEGPIFLNVCLMSPGECNRDKICPMHTVWEEAQEKMMEVLDRANFAELAKAERQAQLTIA*