ggKbase home page

PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

PLM4_65cm_coex_sep2016_NC10_66_7
In projects: PLM4_65cm_coex_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: NC10  →  Bacteria

Displaying items 1-50 of 908 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_coex_sep16_scaffold_32413
Species: R_Rokubacteria_73_56 (100%)
1 2627 bp 61.36 6.05 99.92
PLM4_65_coex_sep16_scaffold_31288
Species: Candidatus Solibacter usitatus (100%)
1 2680 bp 67.09 5.32 99.96
PLM4_65_coex_sep16_scaffold_24170
Species: Candidatus Desulforudis audaxviator (100%)
1 3111 bp 63.77 7.91 90.94
PLM4_65_coex_sep16_scaffold_25041
Species: Thermoanaerobaculum aquaticum (100%)
1 3046 bp 65.00 4.88 85.00
PLM4_65_coex_sep16_scaffold_44803
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)
1 2173 bp 67.74 4.56 99.95
PLM4_65_coex_sep16_scaffold_34389
Species: RLO_Nitrospirae_42_9 (100%)
1 2538 bp 66.23 6.03 88.30
PLM4_65_coex_sep16_scaffold_12072
Species: Nostoc sp. 'Peltigera membranacea cyanobiont' (100%)
1 4668 bp 64.48 6.72 100.00
PLM4_65_coex_sep16_scaffold_46127
Species: Rhodococcus sp. PML026 (100%)
1 2136 bp 69.24 6.46 71.91
PLM4_65_coex_sep16_scaffold_37225
Species: R_NC10_66_22 (100%)
1 2419 bp 65.61 6.45 97.35
PLM4_65_coex_sep16_scaffold_49961
Species: uncultured bacterium lac160 (100%)
1 2038 bp 65.55 6.77 63.89
PLM4_65_coex_sep16_scaffold_73234
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)
1 3026 bp 69.23 5.95 99.93
PLM4_65_coex_sep16_scaffold_37243
Species: RBG_16_Chloroflexi_57_11_curated (100%)
1 2419 bp 65.94 8.43 99.96
PLM4_65_coex_sep16_scaffold_48766
Species: Candidatus Methylomirabilis oxyfera (100%)
1 2068 bp 64.26 6.02 66.73
PLM4_65_coex_sep16_scaffold_51280
Species: Actinokineospora spheciospongiae (100%)
1 2006 bp 64.31 4.79 99.90
PLM4_65_coex_sep16_scaffold_75590
Species: R_NC10_66_22 (100%)
1 2741 bp 65.52 5.42 90.62
PLM4_65_coex_sep16_scaffold_47967
Species: R_NC10_66_22 (100%)
1 2088 bp 66.81 7.18 89.08
PLM4_65_coex_sep16_scaffold_40753
Species: R_Acidobacteria_67_21 (100%)
1 2296 bp 67.42 6.47 77.09
PLM4_65_coex_sep16_scaffold_26519
Species: GWC2_Nitrospirae_42_7_curated (100%)
1 2947 bp 67.56 4.73 99.97
PLM4_65_coex_sep16_scaffold_33645
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)
1 2571 bp 65.81 6.13 95.45
PLM4_65_coex_sep16_scaffold_14494
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (100%)
1 4433 bp 69.46 8.05 99.95
PLM4_65_coex_sep16_scaffold_45708
Species: CG_Elusi_02 (50%)
2 2147 bp 69.40 6.99 86.91
PLM4_65_coex_sep16_scaffold_45458
Species: R_NC10_66_22 (100%)
2 2154 bp 64.30 6.62 86.21
PLM4_65_coex_sep16_scaffold_30811
Species: Rubrobacter xylanophilus (50%)
2 3073 bp 68.27 5.71 96.55
PLM4_65_coex_sep16_scaffold_45973
Species: R_NC10_66_22 (100%)
2 2140 bp 64.91 5.68 77.80
PLM4_65_coex_sep16_scaffold_36807
Species: RBG_13_Spirochaetes_68_11_curated (100%)
2 2437 bp 62.21 4.19 98.24
PLM4_65_coex_sep16_scaffold_45208
Species: R_NC10_66_22 (100%)
2 2161 bp 66.03 7.77 91.35
PLM4_65_coex_sep16_scaffold_96435
Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)
2 2593 bp 65.18 7.06 80.76
PLM4_65_coex_sep16_scaffold_29442
Species: CSP1_5_NC10 (50%)
2 3816 bp 66.82 7.11 87.19
PLM4_65_coex_sep16_scaffold_66212
Species: CSP1_6_Rokubacteria (100%)
2 2312 bp 63.41 5.90 74.22
PLM4_65_coex_sep16_scaffold_41457
Species: Cylindrospermum stagnale (50%)
2 3183 bp 64.56 6.46 88.31
PLM4_65_coex_sep16_scaffold_113602
Species: R_NC10_66_22 (100%)
2 2175 bp 66.16 7.31 75.03
PLM4_65_coex_sep16_scaffold_31047
Species: R_NC10_66_22 (50%)
2 3750 bp 66.24 7.08 87.04
PLM4_65_coex_sep16_scaffold_55449
Species: Candidatus Solibacter usitatus (100%)
2 2856 bp 68.66 4.99 89.60
PLM4_65_coex_sep16_scaffold_96977
Species: R_Ignavibacteria_55_14 (50%)
2 2114 bp 63.06 3.41 92.53
PLM4_65_coex_sep16_scaffold_35028
Species: R_OP3X_63_14 (50%)
2 2510 bp 63.51 9.62 99.08
PLM4_65_coex_sep16_scaffold_48646
Species: R_NC10_66_22 (100%)
2 2071 bp 70.84 5.94 100.10
PLM4_65_coex_sep16_scaffold_50879
Species: Spirochaeta sp. JC202 (50%)
2 2016 bp 63.34 4.76 68.75
PLM4_65_coex_sep16_scaffold_27167
Species: GWC2_Rokubacteria_70_16_curated (50%)
2 2907 bp 66.53 11.66 79.15
PLM4_65_coex_sep16_scaffold_86744
Species: R_NC10_66_22 (100%)
2 2266 bp 69.55 5.96 95.72
PLM4_65_coex_sep16_scaffold_37387
Species: R_NC10_66_22 (50%)
2 2413 bp 69.50 8.02 97.35
PLM4_65_coex_sep16_scaffold_48908
Species: Meiothermus silvanus (50%)
2 2064 bp 64.15 8.87 78.63
PLM4_65_coex_sep16_scaffold_39925
Species: R_NC10_66_22 (100%)
2 2761 bp 69.58 5.38 100.07
PLM4_65_coex_sep16_scaffold_21682
Species: RBG_13_RIF03_48_7_curated (50%)
2 3315 bp 67.63 4.52 99.91
PLM4_65_coex_sep16_scaffold_32734
Species: RLO_Entotheonella_69_37 (50%)
2 2612 bp 64.62 7.18 92.00
PLM4_65_coex_sep16_scaffold_75727
Species: Pleurocapsa minor (50%)
2 2061 bp 67.15 5.60 37.70
PLM4_65_coex_sep16_scaffold_43478
Species: R_NC10_66_22 (100%)
2 2211 bp 65.90 6.78 95.79
PLM4_65_coex_sep16_scaffold_149999
Species: Methanosaeta harundinacea (50%)
2 2170 bp 66.73 5.25 78.66
PLM4_65_coex_sep16_scaffold_112627
Species: Methanocella paludicola (50%)
2 2413 bp 64.11 4.85 71.11
PLM4_65_coex_sep16_scaffold_78091
Species: Streptomyces sp. JS01 (50%)
2 4630 bp 66.20 4.57 100.30
PLM4_65_coex_sep16_scaffold_42214
Species: RBG_16_NC10_65_8_curated (50%)
2 2248 bp 65.04 8.34 88.48
Displaying items 1-50 of 908 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.