ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_1330_5

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(3722..5953)

Top 3 Functional Annotations

Value Algorithm Source
1A family penicillin-binding protein (EC:2.4.1.129) similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 674.0
  • Bit_score: 393
  • Evalue 1.10e-106
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABU58678.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABU58678.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 674.0
  • Bit_score: 393
  • Evalue 5.40e-106
Penicillin-binding protein, 1A family Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMB6_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 674.0
  • Bit_score: 393
  • Evalue 3.80e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseiflexus castenholzii → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 2232
ATGGCTCGAAACGTTCCTGAGAAGATCAAAACCAAGGGGGGCCACCGCCCTCGAGCTCGCATCCATGCGACGTGGTCGCCGATCGGGCAGAAGATGCGCCGCACGGCCACCGTTCGCGGCCTTGGCGCAGTGCTTGCCGTCCTGCTGGTGATCGGCTTCGCCGCCGACGCCTACGCGCAGTCCTTCTTCGACAGCCTGCCCTCGATCCATGGCCTAGACAGCGCCGGCTTCGCCGGCGACACGATCATCACCGACCGCAACGGCGTTCTGCTCGCAGACGTTGGCAACCATGGCGACCACCGCCTGGCCGTGAAGCTCAAGGACGTGGCTCCGATCATGATCCAGGCCACCGTTGCGATCGAGGACAAGGGTTTTTACACCAACCCTGGTTTTGACTTCGCGGGCATCGTCCGCGCGGCCTTCGACAACCTGAAATCCGGTCACATCGTCGGCGGCGGCAGCACAATCACCCAACAGCTTGCCAAGCAGCAGTTCCTGACCCCCGAGCAGACGGTCAGCCGCAAGATCAAGGAGCTGGCGCTCGCCTACGAGCTGGCCCAGACCTACAGCAAAGACCAGATCATGGAGCTCTACCTCAACAAGAGCTTTTACGGCTCGCAGTCATACGGGGTCGAGGCCGCGGCATCAAGCTACTTTCACATTCCAGCCTCCAAGCTCGACCTCGCGCAGGCGGCCATGATCGCCGGCTTGCCACAGGCGCCCACCGAGTGGAACCCGGTCCTTCATCCGGACGCCGCCAAGCTGCGCCAGACCGAGGTGCTCCTGGCCATGGTGCGTTCGAACTTCATCTCGCAAGAGGACATGGACAAGGCGCTGGCGGAGAAGCTGGTTTACCAGGCGCCGGTCAACAGCTTCCTCGCGCCCCACTTCGTCGACTACGTCCTCTCCGAGCTGCGCCAGCTTGGCTACCAGCCAGGTGTCCAGCAGCTGAACGTGAAGACGACGCTCGACTGGGGCAAGCAGCAGATCGGCGAGTCCATCGTCAGCAGCAACCTCGCTGCCAACCTGTGGCGCGACCGCAAAGGACAGCTTTCCTCAGGTCTTGTCGCGGAGGACCCGAAGACAGGCGAGATCCTCGTCATGGTCGGGTCGCCGAGTTACAACTCACCCGGCGGCCAGCAAAACTTCACCACCCTCCCGCGCAACATGGGCTCGTCGATGAAGCCGTACACGTACGGCGCGGTGATCAACGCGCGAGCCGCCACCGTCGATACGCCGGTATACGACGGCCCGAGCCCACTGGTTTACAAAGACGCGTACAACACGACGAAGATCTACAACTACGACGGCAAGACCCACGGCGTGCTGCCACTGAAGAAGGCGATGGGCAACTCGCTGAACATCGCTGCGGTGAAGGTCGAGCTGTCGATCGGCGTGCCCGCCGTCCTTTCTTACATGCGCAACTTGGGCATCAACCCGCTGATTCCTATACCCGGTAGTCAAAACCAATACCGAGCGGGCAACCTTGACGAGTACGGCCCATCACTAACACTGGGCGGCTATCCGATCACCCTGCTTCAGCACGTTGGCGGCATCGCAACCTACGCGGACATGGGCATCTACCACACTCCGGAGGCAATCCTGTCGGTGACGGACTCACACGGTTCGCCGCTCTACACGACCCATGAGAACCAGCGGGCACGCCTGGCCCTAGACCCGGCCGTTGCTTTCATCATGGCCCAGATCATGGCCGACGACCAGAACCGGTGCATGATCTTCGGCTGCAACAGCGCCCTTCACTGGACGGACCGCACGGTTGCGGCTAAGACGGGTACGACTGACGACTTCAGGGACGCCGTGACGATCGCGTTCACCCCGGACCTGGCCGTTGGGCTATGGGTCGGCGACATATTGGCGGACCTGCCACAGAACAGGATGGTCAACAACTCCGACGGCATCTTCGTGGCCTCGCCCGCCGTACACTCGTTTGTTTCGCAGGCGTTGGCTGGAGTTCCGGGCAACCGCTGGTACGCGCCGCCGCCCGGAGTGGTCGCCGGTGCGAACAACAGCTGGTTCTTGAGCGACACCCGGAGCATCGCCAAGCTGCCCGGCGACAACCCGCCGAGCCCGACGCCCGCCCCGGTCGACTACCAGATCCCGCCCGACCCGGGTACGGGCCCTGTGCTGGCCAGCCCATCGCCGAGCCCACCTCCGGTGGTTGATCAATATGGCTGCGTGTTCCCGCTGGTGGGCCCGAAACCGTGCCACTAG
PROTEIN sequence
Length: 744
MARNVPEKIKTKGGHRPRARIHATWSPIGQKMRRTATVRGLGAVLAVLLVIGFAADAYAQSFFDSLPSIHGLDSAGFAGDTIITDRNGVLLADVGNHGDHRLAVKLKDVAPIMIQATVAIEDKGFYTNPGFDFAGIVRAAFDNLKSGHIVGGGSTITQQLAKQQFLTPEQTVSRKIKELALAYELAQTYSKDQIMELYLNKSFYGSQSYGVEAAASSYFHIPASKLDLAQAAMIAGLPQAPTEWNPVLHPDAAKLRQTEVLLAMVRSNFISQEDMDKALAEKLVYQAPVNSFLAPHFVDYVLSELRQLGYQPGVQQLNVKTTLDWGKQQIGESIVSSNLAANLWRDRKGQLSSGLVAEDPKTGEILVMVGSPSYNSPGGQQNFTTLPRNMGSSMKPYTYGAVINARAATVDTPVYDGPSPLVYKDAYNTTKIYNYDGKTHGVLPLKKAMGNSLNIAAVKVELSIGVPAVLSYMRNLGINPLIPIPGSQNQYRAGNLDEYGPSLTLGGYPITLLQHVGGIATYADMGIYHTPEAILSVTDSHGSPLYTTHENQRARLALDPAVAFIMAQIMADDQNRCMIFGCNSALHWTDRTVAAKTGTTDDFRDAVTIAFTPDLAVGLWVGDILADLPQNRMVNNSDGIFVASPAVHSFVSQALAGVPGNRWYAPPPGVVAGANNSWFLSDTRSIAKLPGDNPPSPTPAPVDYQIPPDPGTGPVLASPSPSPPPVVDQYGCVFPLVGPKPCH*