ggKbase home page
Advanced Search
Search Help

PLM0_60_coex_redo_sep16_scaffold_1930_1

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 2..3991

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 1343.0
  • Bit_score: 1548
  • Evalue 0.0
diguanylate cyclase Tax=Deinococcus sp. 2009 RepID=UPI0003B5E56B similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 1329.0
  • Bit_score: 1521
  • Evalue 0.0
Hybrid signal transduction histidine kinase J similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 1363.0
  • Bit_score: 1505
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. SRS2 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3990
GGCGTGGGCGGTGTCTGGAAAGACCTCACCGACAACGTCAACGGGATGGCCGGCAACCTGACCGGCCAGGTGCGCAACATCGCCGAGGTGACAACGGCGGTCGCCAACGGCGACCTCTCGAAGAAGATCACCGTCGAAGTCCAGGGCGAGATCCTGGAGCTCAAGAACACCGTCAACACGATGGTCGACCAGCTCAATGCGTTTGCCGGTGAGGTGACGCGTGTCGCCCGTGAGGTAGGCACTGAGGGCAAGCTTGGAGGCCAGGCTGACGTCAAGGGCGTCGCCGGCGTGTGGAAGGACCTCACCGACAACGTCAACTTCATGGCCGGCAACCTGACCGGCCAGGTGCGCAACATCGCCGAGGTGACGACCGCGGTCGCCAACGGCGACCTTTCGAAGAAGATCACGGTCGACGTCCGAGGCGAGATCCTCGAGCTGAAGAACACCGTCAACGTGATGGTCGACCAGCTGAACGCATTCGCCGGAGAGGTGACGCGTGTCGCCGGCGAGGTCGGCACTGAAGGCCGCCTCGGCGGCCAGGCCCAGGTTCGCGGTGTGGGCGGGGTCTGGAAGGACCTGACCGACAACGTCAACTTCATGGCCGGCAACCTGACGAGCCAGGTGCGCAACATCGCCGAGGTGACGACCGCGGTCGCCAACGGCGACCTGAGCAAGAAGATCACCGTCGACGTTCGAGGAGAGATCCTCGAGCTGAAGAACACCGTCAACACCATGGTCGACCAGCTCAATGCGTTTGCGAACGAGGTGACGCGCGTCGCTCGTGAGGTGGGCACTGAAGGCCGCCTCGGCGGACAGGCGGACGTCAAGGGTGTCGGCGGTGTATGGAAAGACCTGACCGACAACGTCAACACCATGGCCGGCAACCTGACCGGCCAGGTGCGCAACATCGCCGAGGTGACGACCGCGGTCGCCGAGGGCGACCTCAGCAAGAAGATCACAGTCGACGTCCAGGGCGAGATCCTCGAGCTCAAGAACACCATCAACACGATGGTCGACCAGCTCAATGCCTTCGCCAACGAGGTGACGCGTGTCGCGCGCGAGGTGGGCACGGACGGAAAGCTCGGCGGCCAGGCCAAGGTCGAAGGCGTGGCCGGTATCTGGGAAGACCTGACCGACAACGTGAACACCATGGCGAGCAACCTCACCGACCAGGTACGGGGCATCGCTCGCGTGGTCACCGCGGTCGCCAACGGCGACCTGAAAGGCAAGCTGACCCTCGAGGCCAAAGGCGAGATTGCCGCGCTCGCCGACACGATCAACAGCATGACCGGCACGCTGGCTGTGTTCGCCGACCAGGTGACGAGCGTCGCTCGCGAGGTCGGCGTGGAAGGGCGACTGGGCGGCCAGGCAAGAGTGCCTGGAGCCTCGGGCACGTGGCGCGACCTCACCGACAACGTCAACCAGCTGTCCGCCACGCTCACCACGCAGGTGCGGGCCATCGCCGAGGTGGCGACGGCCGTCACCAAGGGTGACCTCACCCGATCCATCGGCGTGGATGCAAGCGGAGAGGTCGCGAGCCTCAAAGACAACATCAACGAGATGATCCGCAACCTCAAGGACACGACCGAGAAGAACACCGAGCAGGACTGGCTCAAGACGAACATCGCGCGATTCACCCGGATGCTGCAGGGCCAGCGCGACCCGATGACCGTGTCGAAGATGATCCTGTCCGAGCTTGCTCCCCTCGTGAATGCGGAGCACGGCGTCTTCTACAGCATGATCGGACCCAACGGACAGCCCACCCACCTGGCGTTCCAGGCGGGATACGCGTACAGGCAGCGCAAGAACCTGCCAAAGGAGTTCCACCTCGGCGAAGGGCTGGTCGGGCAGTGTGCGCTGGAGAAGCGCCGAATCGTGCTCACTGATGTCCCAGGTGACTACATCCGGATCAACTCCGCGCTCGGGGAGGCGACTCCGGCCAACATCGTCGTGCTGCCGGTGCTGTTCGAAGGCGACGTCAGGGCGGTGATCGAGCTTGCGTCGTTCAAGCCCTTCAGCGCGACCCACATGGACTTCCTGGACCAGCTGATGGAGAGCATCGGAATCGTCCTCAACACGATCGAGGCCAACAGTCGCACGGAAGACCTGCTCAAGCAGTCGCAATCTCTCGCCAACGAGCTGCAAAGCCAGCAGGACCAGCTGCAGCGCACCAACGAGGAGCTGGCCGAGAAGGCGCGGCAGCTGGTGCAGCAGAACTCCGAGATCGACCAGAGAAGGAACGAGGTCGAGTCGGCCAAGGTCCTCGTCGAGGAAAAGGCCGAGCAGCTCGCGCTGACCTCTCGCTACAAGTCCGAGTTCCTGGCCAACATGTCGCACGAGCTCCGGACGCCTCTGAACAGCCTGCTGATCCTGGCCCAGGAGCTGGCCGCCAACCCGGACGGGAACCTGCTCGCGAAGCAGATCGAATACGCAACCATCATTCGTTCGTCCGGGACGGACCTCTTGAAGCTGATCAACGACATCCTCGACCTGTCGAAGATCGAGTCCGGCACGGTGACCCTCGACATCGCCAACTGGCCGCTCGCAGAGCTGAAGCCGATGCTGGAGCGCACGTTCCGGCATGTCGCGGAGGCGACCAAGCTTGCGTTTTCGATCGATCTGCGGCCGGGGCTGCCCGAAACGATGCAGACGGACCCGCAGCGCTTGCAGCAGATCCTGAACAACCTGCTCAGCAACGCGTTCAAGTTCACGGAACGTGGAAAGGTGGAGTTTGTCGCGCAGGTCGCAACCTCCGGATGGGGCGGCGCCGGCAGCGAGCTCCTCGACCGGGCGGCGGCGGTGATCGCGTTCAACGTCATCGACACCGGGATCGGTATTCCGGAGGACAAGCAGCAGTCGATCTTCGAGGCTTTCGCGCAGGGAGACGGCACGACCAGCCGCAAGTACGGCGGCACGGGGCTAGGACTCTCCATCTGCCGTGAGCTCACAAGGCTGCTGGGGGGTGAGATCAGGCTCGAGAGCGAGGCGGGCGTCGGGAGCGTCTTCACGGTGTACCTGCCGGTTGGCACGCCGTCGCAGCCTCGCCGCAGCGGGTCGAACGGGACCGCGAACGGCCGCTCGGACGGTTCGATGCAAACCGCGCCGCGGCCTGTCGGGACCGCGGTGGCGGTCGGCGCAGGGTGGCACGTGGAGGCGTCTCATTCAGTCTCTACTCGCGAGCAAGCAGGGGCAACGGACAAGACCCTGCTCGTCGTCGAGGACGACCCTTACCAGAGACAGCACATCGTGGATCTCATGGCGTCCGTCGACGCTCGCACGATCGCGGTCGGATCTGGTGAGGAGGCGCTGGCCTTGCTCGAGGACCAGAAGTTCACATGCGTCGTCATCGACCTTGGCCTACCCGGTCTCAGCGGCTGGCAGGTCATCGACCATATCCGGAGCCGCAAGGCCCTCAGGTCCATGCCTCTGCTGGTGTACACGGCCAGGGACCTGACCAAGAAGGAAGAGCTCAAGCTCGGGCGCGCGACAAAAACCATCGTGATCAAGGAGGTCAGGTCACCCGAGCGTTTGAAAGACGAGGTGACCGCGATCCTCGAGGCCGGCCCACCCATGACTCAATCTGGATCGAACGGCACGCAGCCCGCCGACACTGCGCTGGCCGGCAAGAAGATCCTCGTCGTTGACGACGACATCCGAAACATATTTGCCCTCACCGCCATGCTCGAGCGCCAGCAGATGGAGGTGATCTCTGTCGATTCGGGCCAGGAGGCCCTGGATACCCTGGCGGCAAGGAGCGACATCGAGATCGCGCTGGTCGACGTCATGATGCCGGAGATGGACGGCTACCAGACGATGCGGAAGATGCGCGACCAGGCTTCGTTCATCGACCGGCCGATCATCGCCCTCACCGCCAAGGCGATGAAAGGAGATCGCGAGAAATGCATCGAAGCGGGAGCGTCCGACTACATCGCCAAGCCGGTGAACACCCAGGAGCTGCTGTCTATGCTCAAGTCCTGGCTCACTCCTTGA
PROTEIN sequence
Length: 1330
GVGGVWKDLTDNVNGMAGNLTGQVRNIAEVTTAVANGDLSKKITVEVQGEILELKNTVNTMVDQLNAFAGEVTRVAREVGTEGKLGGQADVKGVAGVWKDLTDNVNFMAGNLTGQVRNIAEVTTAVANGDLSKKITVDVRGEILELKNTVNVMVDQLNAFAGEVTRVAGEVGTEGRLGGQAQVRGVGGVWKDLTDNVNFMAGNLTSQVRNIAEVTTAVANGDLSKKITVDVRGEILELKNTVNTMVDQLNAFANEVTRVAREVGTEGRLGGQADVKGVGGVWKDLTDNVNTMAGNLTGQVRNIAEVTTAVAEGDLSKKITVDVQGEILELKNTINTMVDQLNAFANEVTRVAREVGTDGKLGGQAKVEGVAGIWEDLTDNVNTMASNLTDQVRGIARVVTAVANGDLKGKLTLEAKGEIAALADTINSMTGTLAVFADQVTSVAREVGVEGRLGGQARVPGASGTWRDLTDNVNQLSATLTTQVRAIAEVATAVTKGDLTRSIGVDASGEVASLKDNINEMIRNLKDTTEKNTEQDWLKTNIARFTRMLQGQRDPMTVSKMILSELAPLVNAEHGVFYSMIGPNGQPTHLAFQAGYAYRQRKNLPKEFHLGEGLVGQCALEKRRIVLTDVPGDYIRINSALGEATPANIVVLPVLFEGDVRAVIELASFKPFSATHMDFLDQLMESIGIVLNTIEANSRTEDLLKQSQSLANELQSQQDQLQRTNEELAEKARQLVQQNSEIDQRRNEVESAKVLVEEKAEQLALTSRYKSEFLANMSHELRTPLNSLLILAQELAANPDGNLLAKQIEYATIIRSSGTDLLKLINDILDLSKIESGTVTLDIANWPLAELKPMLERTFRHVAEATKLAFSIDLRPGLPETMQTDPQRLQQILNNLLSNAFKFTERGKVEFVAQVATSGWGGAGSELLDRAAAVIAFNVIDTGIGIPEDKQQSIFEAFAQGDGTTSRKYGGTGLGLSICRELTRLLGGEIRLESEAGVGSVFTVYLPVGTPSQPRRSGSNGTANGRSDGSMQTAPRPVGTAVAVGAGWHVEASHSVSTREQAGATDKTLLVVEDDPYQRQHIVDLMASVDARTIAVGSGEEALALLEDQKFTCVVIDLGLPGLSGWQVIDHIRSRKALRSMPLLVYTARDLTKKEELKLGRATKTIVIKEVRSPERLKDEVTAILEAGPPMTQSGSNGTQPADTALAGKKILVVDDDIRNIFALTAMLERQQMEVISVDSGQEALDTLAARSDIEIALVDVMMPEMDGYQTMRKMRDQASFIDRPIIALTAKAMKGDREKCIEAGASDYIAKPVNTQELLSMLKSWLTP*