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PLM0_60_coex_redo_sep16_scaffold_1944_5

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(8128..8871)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF0_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 83.0
  • Bit_score: 56
  • Evalue 3.70e-05
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 83.0
  • Bit_score: 56
  • Evalue 1.00e-05
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 83.0
  • Bit_score: 56
  • Evalue 5.20e-05

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGACCGGCGTCCGCAGCGGACCGATCTACAGGCGCCGGGTTCGTGGCGCGAACAAAGGGCTCAAGCGGATGCTCGTCGAGGGCATGACCGACAGTGGCGACCAGACCCAGACCTGGAAGAGGTTTTCAGGCGCTATGGTTCGGCAGGCTGTTGATGAGGCGGTCAGCTCGTTGCCCCCGCGTCAAAAGCAGCTGATCAAGCTCGCTTACTTCAGCGACCTCAGCAACCGCGAGATCGCTCTGGGCCTGGGGATCACCTTGAGCAGTGTCGAGCGAGGCCTGCGCGAGGCGATCGCCCGGGTGAGCGAATACGTGGAGCGAGGAAAGGGCGTTGGCCGCAAAGCGATCTATGCGATCGGGCTCTTCCTCGCCGGACGGCAAATGATCAGGGCCGGCGTGATCGTCGTCGCCACCGCTACGGCCGGGGCGGTCGTGTCGGCGCAACCCACATCACCTGCGCAGCTCGTGCCCGTCGAGCGAGCAACCGTGCCGGCGGTTACGTCGGTGCAGCACTATGTCCCGCTGCAGCACCAGGTCGTCGACGTCGCCGAGACCACCAACGCGGTCGTGGAGACCCAGGCCGCCTCGGGGTCGCTGAAGGTCGGCGGGCTGGAGGTCACGACGCCGAAAATCGACGTCCCGGCAGTGACGCTCCCTCCTCTAAACCTGCCGGCGGTGAACGCGCCGCCGGTGAAGCAGCTGCCGCCGCCGCCGCCGATCCCGCCCTTCATCACGAACAGCTAG
PROTEIN sequence
Length: 248
MTGVRSGPIYRRRVRGANKGLKRMLVEGMTDSGDQTQTWKRFSGAMVRQAVDEAVSSLPPRQKQLIKLAYFSDLSNREIALGLGITLSSVERGLREAIARVSEYVERGKGVGRKAIYAIGLFLAGRQMIRAGVIVVATATAGAVVSAQPTSPAQLVPVERATVPAVTSVQHYVPLQHQVVDVAETTNAVVETQAASGSLKVGGLEVTTPKIDVPAVTLPPLNLPAVNAPPVKQLPPPPPIPPFITNS*