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PLM0_60_coex_redo_sep16_scaffold_24430_4

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2668..3174)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 164.0
  • Bit_score: 96
  • Evalue 6.20e-18
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 158.0
  • Bit_score: 96
  • Evalue 1.70e-17
Tax=RBG_13_Chloroflexi_53_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 163.0
  • Bit_score: 102
  • Evalue 4.30e-19

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Taxonomy

RBG_13_Chloroflexi_53_26_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 507
GTGCTCGCCGACCGGCCGCAATTCGAAGATCTCTACCGCGCCTACCTGGGCCGGATCTACGCCTATGTTCGGGCGCAGGTCCCGAGCTCGGCCGACGCGGAAGACATCACGGCCCAGGTCTTCATGAACGCGTACCAGGCTTACGCTCGTTTCGAGGCGCGCAACACAACTCCGGCCGCGTGGCTGTTTCGCATCGCGCGCAACGCGACCCTCGACCACTTTCGAGCCCACGGCCGGCGCGAACGCCTGCGCCGGACCATCGAGCATCAACCGATGGCGGAAGAAGATCCGTCCGGCATGGCCGAGGAGCGCATCCAGTACCGCGCCCTGCTCGAGCGCGTCGGCCAGCTGCCCGAGCGGCAGCGAGATGCCATCTCGCTTCGACATTCCGGCCTCAGCTTCGAAGAGGTCGGCACTTTGCTGAAATGCAGCGAAGACGCGGCCAAGATGCTCTACCACCGCGCGGTGAAAGGTCTACGCGATGCGGTGGAGAAGGAGGGCGTTTGA
PROTEIN sequence
Length: 169
VLADRPQFEDLYRAYLGRIYAYVRAQVPSSADAEDITAQVFMNAYQAYARFEARNTTPAAWLFRIARNATLDHFRAHGRRERLRRTIEHQPMAEEDPSGMAEERIQYRALLERVGQLPERQRDAISLRHSGLSFEEVGTLLKCSEDAAKMLYHRAVKGLRDAVEKEGV*