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PLM0_60_coex_redo_sep16_scaffold_49682_2

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(567..854)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AbrB family domain protein bin=GWC2_Chloroflexi_73_18 species=Nocardiopsis alba genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 82.0
  • Bit_score: 95
  • Evalue 1.60e-17
looped-hinge helix DNA binding domain, AbrB family similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 84.0
  • Bit_score: 73
  • Evalue 1.90e-11
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 86.0
  • Bit_score: 107
  • Evalue 5.80e-21

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGAAAGGATCCAGGGCGTCGGTTGCTGTAATTAGAGACAAAGGCCAGGTCACGATTCCGTCTCGGATCCGCAAAGCAGCGCATCTTGGCGAGGGAGACTCGGTCGAAGTGGTCATTACGGCGGATGGAATCCTCTTGCGACCACGAAAGCTCGTTGACGCCACCCAGGCTTGGTTTTGGACACGTTCCTGGCAGAGAGCCGAGCAGCAGGCATCGGAGGACATCCGCAAGGGACGAACGCGAACCTATGAGTCGGATAAGGACTTCTTGCGCCGATTCGCAAAATAG
PROTEIN sequence
Length: 96
MKGSRASVAVIRDKGQVTIPSRIRKAAHLGEGDSVEVVITADGILLRPRKLVDATQAWFWTRSWQRAEQQASEDIRKGRTRTYESDKDFLRRFAK*