ggKbase home page

PLM1_60_coex_sep16_scaffold_8710_3

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: 2488..3837

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Pelobacter_58_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 451.0
  • Bit_score: 454
  • Evalue 1.10e-124
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 451.0
  • Bit_score: 446
  • Evalue 5.00e-123
Tax=CG_Delta_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 443.0
  • Bit_score: 478
  • Evalue 1.00e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Delta_01 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGGCAGGTGGCGAACGCATATTGATCGTCGAAGACGAAGAGCTCATGCGCGAGCTCTTGACGAAGATTCTTGCCGGGGAAAACTATCGCATCTATCAAGCCTCCAGCGCTGAGGAGGCCATGAAACTGATGCAGGATCAAGTCTACGATCTGGTGCTGACCGACCTCCGGCTGAAGGGCATGAACGGCTTGCAATTACTCACCGAAGTACGGGCCCTAGACCCCGAGATCGTGGTCATCGTCATGACCGCCTATGCCTCTGTGGAGACGGCCGTTGAGGCCATGCGCAAGGGCGCCTACGACTATATTACCAAGCCCTTCATCAACGAGGAGATCCGGGTGATGCTGCGCCGGGCCCTCAATCAACGACATTTATCGCGCGAAAACCGCCATCTCAAGCGTGAGCTCCGTGAACGCTACCGTTTCGAAAACATCGTCGGCAACAGCGAGGCCATGGAAAAGGTCTATCGCCTCATCGAGAAGGTGTCAGCGATTTCGAGCAATGTGCTGATCTTCGGGGAAACCGGTACCGGCAAGGAATTAGTGGCCCGGGCGATGCACTACAATTCTGAACGCGCTGACCGACCATTTGTTGCGGTGAACTGCGGTGCGTTGACCGAAACCCTCCTCGAAAGCGAGCTCTTTGGCCATGTCAAAGGCGCGTTTACGGGGGCCATCGCCAACCATGAAGGATTTTTTCGGACGGCTGATAAAGGCACCTTGTTCCTCGATGAGCTTAGCGAAGTCTCGCATGGCTTGCAGGTCAAGCTCCTGCGGGCTATTCAAGAACGCGAGGTCACTCCGGTGGGCGGACGTGAACCCCTGAAATTCGATGTCCGATTCATCGCTGCAACCAATAAAAACCTCGAAGATGAGGTGAAGCAGGGCACCTTCCGCGAGGACCTCTTTTATCGCATCAATGTCATCACCATCCCCCTGCCACCGTTGCGGGATCGCAAGGAAGATGTGCCCCTGCTCGTGAACCATTTTCTACAAAAGTATGCGCAGCGACTTGGAAGACCCTCGGTCAAGATCTCGCGTGAGGTATTGCAGGTGCTGGTCAATTATGACTGGCCCGGAAACGTGCGCGAGTTGGAGAATATGATCGAGCGCGCGGTAGCCTTATGCGAGGAAGATGTCATCGAAACCACAGATTTGCCTGAGAAGCTGACCCAGGTTCGCATCGCCATCCGCGATTTGGACGAGTATGAGATGACGCTCGACGCACTGGAAGAGCAACACATCAAGAAAGTGCTTCACAAAGTCAGTGGTGATAAAGTCAGAGCCTCCCAGATCCTGGGAATTAACCTCTCCACGTTGTATCGCAAATTGGCACGTTATGAGGCCTAA
PROTEIN sequence
Length: 450
MAGGERILIVEDEELMRELLTKILAGENYRIYQASSAEEAMKLMQDQVYDLVLTDLRLKGMNGLQLLTEVRALDPEIVVIVMTAYASVETAVEAMRKGAYDYITKPFINEEIRVMLRRALNQRHLSRENRHLKRELRERYRFENIVGNSEAMEKVYRLIEKVSAISSNVLIFGETGTGKELVARAMHYNSERADRPFVAVNCGALTETLLESELFGHVKGAFTGAIANHEGFFRTADKGTLFLDELSEVSHGLQVKLLRAIQEREVTPVGGREPLKFDVRFIAATNKNLEDEVKQGTFREDLFYRINVITIPLPPLRDRKEDVPLLVNHFLQKYAQRLGRPSVKISREVLQVLVNYDWPGNVRELENMIERAVALCEEDVIETTDLPEKLTQVRIAIRDLDEYEMTLDALEEQHIKKVLHKVSGDKVRASQILGINLSTLYRKLARYEA*