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PLM1_60_coex_sep16_scaffold_9984_5

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: 5048..5635

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67K52_SYMTH bin=16ft_combo_ws3_JS1 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 181.0
  • Bit_score: 149
  • Evalue 1.90e-33
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 175.0
  • Bit_score: 142
  • Evalue 8.70e-32
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 181.0
  • Bit_score: 149
  • Evalue 2.70e-33

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 588
ATGAATCTTGCAAAAAGGATTCAGGACCTGCGGCGGCGACGAGGGCTGACGACTGGCGAGCTGGCGGCACGAGTCCAGGTCACCAGCGGTTTTATTAGCCAGCTCGAACATAGCAAGACCGAACCCTCCCTGCAGACCTTGCAGCGGGTAGCCGCGGCATTGCAGGTGCCGCTGTCGTACCTGTTACTCGATGACGACACCAAACCTCAGGTCATTCGCAAGGGCGAGCGCAATGTCATCCATGTCGGCAATGGAGGGCTACGAGCCTCGATCCTGTCTCCCCTCCCCCCACGCAATCTGGAGCTCGTGCTGTTAGAACTCCCACCGGATGGAATGTCGTGGACGAAAGTCCAGTTCCATGATGGACACGAATGCCATCTGGTCGTGAAAGGTAAAGTGCGGGCATATTATGGCGATGAAAGTCATCTCCTCGATGCAGGAGACAGTATCTTCTGGGATGGTACCGCCCCCCACCGTTTGGAGAACGTCGGTGATGAGATGGCGCAGATCGTCATGGCGTTGACACCGCCGGCTTTTCTACCGTTGGAACAGATTGAAACGGGTAAGCGAACCAAGACATGTACATGA
PROTEIN sequence
Length: 196
MNLAKRIQDLRRRRGLTTGELAARVQVTSGFISQLEHSKTEPSLQTLQRVAAALQVPLSYLLLDDDTKPQVIRKGERNVIHVGNGGLRASILSPLPPRNLELVLLELPPDGMSWTKVQFHDGHECHLVVKGKVRAYYGDESHLLDAGDSIFWDGTAPHRLENVGDEMAQIVMALTPPAFLPLEQIETGKRTKTCT*