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PLM1_60_coex_sep16_scaffold_11303_3

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: comp(2789..3442)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Cohnella laeviribosi RepID=UPI000364EE78 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 217.0
  • Bit_score: 248
  • Evalue 5.80e-63
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 218.0
  • Bit_score: 247
  • Evalue 2.80e-63
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 217.0
  • Bit_score: 247
  • Evalue 1.10e-62

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Taxonomy

Alicyclobacillus acidoterrestris → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 654
AATCGCGGTCTCCCACTCCTTGATCTCATTCAGGAAGGCAATATTGGCTTGATGCGAGCAGTCGAAAAATTCGATCACAGGCTCGGGTTCCGCTTCAGCACCTATGCCAGTTGGTGGATTCGGCAGGCGATCGCCAGAGCCATCGCCGAGCAGGCGCGCACCGTGCGAATGCCTGTGCACGTGAGCGAGAGCATGGGACGCTTGAAGAGGGTGGCTAATAATCTCCGCAAAGATCTGGAGCGCGAGCCAACTGCGCAGGAACTGGCGGATGCGTTGCAGCTTTCCATCGACAAGATTCGCACAATGCAGGCGAGTGCGAAACCGATGCTATCGTTGGAAACCCCTATTGCTGACGGACAAAGCCGCCTAGGTGATTTCATCCCTGATCGCACATTCATCAGCCCAGTGGCTGCTGCCATCGAAGAGGAATTGAACGAATACCTGAATAGCTGCCTGCAGGCTCTCTCTGCCAGGGAAGAGTTCATTCTGCGAGCACGGTTTGGTCTTAGCAATGGGGAGGTCCGCACCCTGGAGGAAATCGGTAAAGAGCTTAAGCTCAGCCGCGAGCGGGTGCGCCAGATTGAAGCTCGCGCCCTTGAGAAGCTCCGGCATCCCTCTAGGAATCGACGTTTGCGCGGCTTCCTCGAAAACTAA
PROTEIN sequence
Length: 218
NRGLPLLDLIQEGNIGLMRAVEKFDHRLGFRFSTYASWWIRQAIARAIAEQARTVRMPVHVSESMGRLKRVANNLRKDLEREPTAQELADALQLSIDKIRTMQASAKPMLSLETPIADGQSRLGDFIPDRTFISPVAAAIEEELNEYLNSCLQALSAREEFILRARFGLSNGEVRTLEEIGKELKLSRERVRQIEARALEKLRHPSRNRRLRGFLEN*