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PLM1_60_coex_sep16_scaffold_17635_2

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: comp(591..1250)

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 219.0
  • Bit_score: 287
  • Evalue 1.60e-74
Endonuclease III bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 215.0
  • Bit_score: 282
  • Evalue 3.70e-73
endonuclease III-like DNA glycosidase similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 219.0
  • Bit_score: 275
  • Evalue 1.30e-71

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Taxonomy

Geobacter sp. OR-1 → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGCACGTTTTGATATCCATCAAGCAATGGCGGCATTACAGGCCGAGGCACCTGCCTGGACGGAAACCGCGCTGACCACAGTAGCGCGGACGATGGGGCGGGACCCATTCAAAATCTTGATCGGCTGTCTGCTCAGCCTCCGCACCAAGGATGAGACGACCGGCCCTGCAGCGGCGCGGTTGTTTGCCCTGGCGGGCACGGCTGAGGCGATGCTACAACTGTCGATGGGACAAATCGCCAAGGCGATTTATCCAGTCGGATTCTATCGCACCAAAGCCAGCACCATCCTGGAGATCTGTGGCACACTGGTCGAGCGCTATGGCGGTCAGGTTCCAGAGACGATGGAGGGATTGCTGGACCTGAAAGGTGTAGGGAGGAAGACCGCGAACCTGGTGCTGACGATGGGTTTCCAGAAGCCAGCCATCTGTGTGGATACCCATGTCCACCGGATCTCGAACCGCTGGCGGTATGTCCGCACCAAGACCCCTGAGGACACGGAGTTTGCGCTGCGCCGCAAGCTGCCGCAGGCGTATTGGATGGTGTACAACGACCTGCTGGTGGCCTTTGGGCAGAACATTTGTAAGCCGATCTCGCCGCTGTGTGGACAATGCCCGTTGGCTGACAGCTGTCCGCAGATCGGTGTCACACAACATCGCTGA
PROTEIN sequence
Length: 220
MARFDIHQAMAALQAEAPAWTETALTTVARTMGRDPFKILIGCLLSLRTKDETTGPAAARLFALAGTAEAMLQLSMGQIAKAIYPVGFYRTKASTILEICGTLVERYGGQVPETMEGLLDLKGVGRKTANLVLTMGFQKPAICVDTHVHRISNRWRYVRTKTPEDTEFALRRKLPQAYWMVYNDLLVAFGQNICKPISPLCGQCPLADSCPQIGVTQHR*