ggKbase home page

PLM1_60_coex_sep16_scaffold_1265_6

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 6351..7949

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase and ligase bin=GWC2_Chloroflexi_73_18 species=Methylobacterium nodulans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 524.0
  • Bit_score: 840
  • Evalue 5.00e-241
AMP-dependent synthetase/ligase similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 575.0
  • Bit_score: 321
  • Evalue 3.70e-85
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 523.0
  • Bit_score: 850
  • Evalue 1.10e-243

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1599
GTGAAGCCAGGAGGACCCATCCCGGCCACCCTGACCGAGCTGATGGGGGGCAGGGCCGCCCAGGATCCTGACACCCCGTACTTCCACCTCTTCGACGAGGCGGTGCCGTACGGGCGTCTCTGGCGGGAGAGCGCGCGCTACGCGGCCGGGCTGCGGCGCGCCGGCATCGACCGCGGCGACAAGGTCTGCCTCATCTACCCCACCTGCGCCGAGTTCTTCTACACCTTCTTCGGGGCCCTCCGTCTGGGCGCGGTGCCGGTGCCGATCTACCCCACCCTCGGGGTGGAGGCGACCGCCAACGTCTTCCGCGACTCGGAAGCGAAGGCGGTGGCCACCATCGGCTGGTTCCGCACGGGCGTGGAGGAATCGCAGGCGGCCGCGCCCAATATCCGGCACGTGCTGGAGCCGAGCGATCTCGAGGTGGACGATCCCGCGCCGCCCTTCCCGACCGCGACCGCCGACGACGTGGCCTTCATCCAGTACACCTCGGGCAGCACCGGCCAGCCGCGCGGGGTCGTGCTGAGCCACGCCAACGTGGTGCGCACCGTCGAGTTCATGGCGGAAGCCGCGCAGCTCACCCGCGACGACGTGGTCGTCTCGTGGCTGCCGCTCTACCACGACATGGGCCTGATCGGCTGCGGGTTCACCCCACCCTGGAGCGGGGCGCCGCTCCACCTCCTGCCGCCCGATCTCAAGAACCCGCGCGTCTGGCTCGAGCTGGTCGGCCGGGTTGGCGCCACCTTCACGGTCTCGCCCGACTTCGGCTATCGCAACTGCGTGCGCAATATCCACGACACCACCGGCCTCGATCTCTCCTCGCTCAAGCAGGCGCTCTCCGGCGCCGAGCCGGTCCGCCTCAGCACCATCGAGGCCTTCGAGCGGAAGTTCGGCACGCAGAACCTCATCACGCCCTGCTACGGCCTGGCCGAGGCCACCCTGGCGGTGGCGATCTGGCCGCGGCGGACGCCGCTCCGCCTGGACAGCTCGGGCCGGTTCCTCTCGGTGGGCCAACCCTGCCGCGGCGTGCGCGTGCGCATCATGGACGGCGAGGAGGAGGTCAAGCCGGGCGTCGAGGGCGAGATCTGCGTGGCGAGCCCCGGGGTGATGCAGGGCTACTACAACAATCCCGAGGCCACCCGGAACATCCTCTCGCCCGACGGCTGGCTGCGCACCGGCGACCTCGGCTTCGTCGACGCGGAGGGCTTCCTCTACGTCACCGGGCGGCTCAAGGACGTGATCATCCTGGGCGGTGAGAACGTGATCCCCGCCGACATCGAGGAGATCGTGGACCACGTGCCGGGCGTGCGCTACTCGGCGGCCGTCGGCGTGGAGAGCGCCCGCACCGGCACCCAGCGGCTGCACGTGGTGGCCGAGGTCCGCGAGCAGGCGGCCGACGCGGCCGATCACTCGCGCCTGGTTCGCGAGATCGTGCAGCGGGTCCGCGAGGGACGGGGCCATCGCCCCGCCCGGGTGCTCCTGGTCCTGCCCAGCACCATCCCCAAGACCTCGTCGGGCAAGATCCAGCGCTCGCGTCTCGGGGAAATGATCGCGCGCGACGAGCTGCGCGACCGCATCGTCTACTCCTCCGGCGCCCGATGA
PROTEIN sequence
Length: 533
VKPGGPIPATLTELMGGRAAQDPDTPYFHLFDEAVPYGRLWRESARYAAGLRRAGIDRGDKVCLIYPTCAEFFYTFFGALRLGAVPVPIYPTLGVEATANVFRDSEAKAVATIGWFRTGVEESQAAAPNIRHVLEPSDLEVDDPAPPFPTATADDVAFIQYTSGSTGQPRGVVLSHANVVRTVEFMAEAAQLTRDDVVVSWLPLYHDMGLIGCGFTPPWSGAPLHLLPPDLKNPRVWLELVGRVGATFTVSPDFGYRNCVRNIHDTTGLDLSSLKQALSGAEPVRLSTIEAFERKFGTQNLITPCYGLAEATLAVAIWPRRTPLRLDSSGRFLSVGQPCRGVRVRIMDGEEEVKPGVEGEICVASPGVMQGYYNNPEATRNILSPDGWLRTGDLGFVDAEGFLYVTGRLKDVIILGGENVIPADIEEIVDHVPGVRYSAAVGVESARTGTQRLHVVAEVREQAADAADHSRLVREIVQRVREGRGHRPARVLLVLPSTIPKTSSGKIQRSRLGEMIARDELRDRIVYSSGAR*