ggKbase home page

PLM1_60_coex_sep16_scaffold_5886_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(2662..3534)

Top 3 Functional Annotations

Value Algorithm Source
TonB family protein bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 334.0
  • Bit_score: 199
  • Evalue 2.40e-48
TonB family protein similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 295.0
  • Bit_score: 109
  • Evalue 1.20e-21
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 331.0
  • Bit_score: 201
  • Evalue 1.20e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 873
GTGATCCTGCGCCTCGGGGGCGTGATGCTGTCGGTGGTCCTGCACGTGGGGCTCATCGCCCTGCTGCTGGCCTGGTCCGCCACCGACTGGACGCGCCCCGTCTTCGTGGACCTGGGGGAGCGCGCGGACTCCCCCGGCTCGCCCTCCGCGGACCCGTCGCCCGCGCGGTCGGCGCGCCCGGCGGCACGGGCCGCGGGAGCCGCGCCGGCACCGGGTCGCGCACCGGCGCGGCCCGAACCGGTCGCGCCCGCGGCCTCCAGCGCGCCGGTTCCCGCTCCGGCCCCCCTGGCGGCGGAGCCCCCCCCCGTGGTTCCGGTGGTTCCGGTGGCTCCGCCGGCTCCCGCCATCACCGTCGAGCCGGTACCCGCTCCCTCGGCCGCGCTGGTGCCCGCCCTGCCAGCCGCGCCGTCCGCTTCGTCCGCGGCATCCGGCCCGGCGGATGGACGCGTCGGCGCCACCGGCTCGGGCGCGGGTGCCGGAAGCGGCGCGCAGACGCGCGGCGATGCGGACCGAGGATCGGGAGGCGCACCCGGTTCGCCCCTCGCGCTCGCCACGCCGGGCCCGGGCGGCTCCGGCGCGCCCCCGCCCGAGTACGGCCCGTACCTCCGGCACTTCCGCCAGCGCGTTCAGGAGAGCCTGATCTACCCGCTCGCGGCGCGGCGGCAGGGGCTCAGGGGCACGGTGGAGCTGCACGTGTGGATCGAGGCCACCGGCCGGGTGCGCGACGTCCAGGTCGCGGGTTCGTCCTCGCACGCCGTCCTGGACGACGCCGCGGTCGAGACCATCCGCCGCCTCGGGCCGATGCCGTTCCCGGACTCGTTGCCGCGCCGGCCACTGCTCATCCGGCTCCCGCTCGTCTACGAGCTGCGATGA
PROTEIN sequence
Length: 291
VILRLGGVMLSVVLHVGLIALLLAWSATDWTRPVFVDLGERADSPGSPSADPSPARSARPAARAAGAAPAPGRAPARPEPVAPAASSAPVPAPAPLAAEPPPVVPVVPVAPPAPAITVEPVPAPSAALVPALPAAPSASSAASGPADGRVGATGSGAGAGSGAQTRGDADRGSGGAPGSPLALATPGPGGSGAPPPEYGPYLRHFRQRVQESLIYPLAARRQGLRGTVELHVWIEATGRVRDVQVAGSSSHAVLDDAAVETIRRLGPMPFPDSLPRRPLLIRLPLVYELR*