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PLM1_60_coex_sep16_scaffold_5886_5

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4194..4739)

Top 3 Functional Annotations

Value Algorithm Source
Cobalamin uptake ligand-gated TonB-dependent outer membrane channel bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 181.0
  • Bit_score: 255
  • Evalue 4.00e-65
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 183.0
  • Bit_score: 92
  • Evalue 7.40e-17
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 181.0
  • Bit_score: 255
  • Evalue 5.60e-65

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 546
GACCAGAAGCTCTGGAACAACCGGATCCGGCTCGGACTCACCTACTTCCAGAACGAGTTCAAGAACCTGATCACGTGCTGCACCCCGATTCCCACCGCGCCGCTCGGCGGGCCCTTCAACGTGGGGCGCGCCCGCAGCGCGGGCATCGAGTTCACCTCCGAGGTGGACGTGCTGCCGAACCTGGTCGCCTCGCTCAACTACACCTACACGGACTCGGAGAACCTGGCCACGGACCGGCTGCTGCCGCGGGAGCCGCGGCACCGCTGGAACATCGGGCTCACCTGGGAGCCGATCACAAAGCTCTCGCTCTTCACCCAGGTCCACGTGGTGACCGAGCAGTTCGAGCCTTTCGGCGAGGTCTACAATAGCGGCCACACGCGGGTGGACATCGGCGGAACCTGGCGCATCGTGGAGCGCATGGGCTGGCTCCGGAAGCTCGAGCTGACCGCGCGCATCCAGAACCTGCTCAACGAGGGCTACGCGGAGGTGCGCGGGTTCCCCGCGCTCGGCATCAACGCCTTGGTCGGCCTGCGGGCGTCGTTCTAG
PROTEIN sequence
Length: 182
DQKLWNNRIRLGLTYFQNEFKNLITCCTPIPTAPLGGPFNVGRARSAGIEFTSEVDVLPNLVASLNYTYTDSENLATDRLLPREPRHRWNIGLTWEPITKLSLFTQVHVVTEQFEPFGEVYNSGHTRVDIGGTWRIVERMGWLRKLELTARIQNLLNEGYAEVRGFPALGINALVGLRASF*