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PLM1_60_coex_sep16_scaffold_6691_4

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4711..5439)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 240.0
  • Bit_score: 224
  • Evalue 2.80e-56
pseudouridine synthase bin=GWF2_Methylomirabilis_70_14 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 240.0
  • Bit_score: 349
  • Evalue 2.70e-93
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 240.0
  • Bit_score: 346
  • Evalue 1.90e-92

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 729
AGCATCGTCTTCGAGGATGAGCACGTGCTCGTCGTCGACAAGCCGGCGGGCATGGTGACGCATCCGGGGGCCGGGCGGCCTACCGGCACGCTGGCCGCGGCCGCGCTCGCTCACGCTCCCGAGATGGCCGGGGTCGGCAGTCCCCGCCGACCGGGGATCGTCCACCGATTGGACAAGGGCACCTCCGGGCTGATCGTGCTGGCCAAGACCCAGCCGGCCTACGACGCCCTCACCGCCCAGCTCGCGCGGCGCACCGTCACCCGGCGCTATCTCTGTCTCGCCCAGGGGTCGGTGCGGCGGGCCCAGGGCGTGATCGACACGACGATCGGGCGCGATCCGCGCTCGCGCGTCCGCATGGCCGTGCTGAAGGAGGGTAAGGGCAAGCGGGCGGTCACGCGTTTTCAGGTGCTCGAGCGCCTCGGCGGCGCAGCCGGCGCCGTCTCTTTCCTGGAGTGCCGGCTCGAGACCGGGCGCACCCATCAGATCCGGGTGCACCTGGCCTCGCTGGGCCACCCGCTCCTGGGAGACGATACCTACCGGGGGCGTCGCGCGGCGCCGGCGGGGGATCCCCGGCTCACGGATCTGATCGCCGGACTCGGCGGAGTGGCTCTCCACGCGGCCGGTCTCGCGTTCGCGCACCCGACGACGGGCGCGCCGATGGAATTTTCGTGTCTTCTGCCCGACAGGATCGGCCGGATCTTGTCTCATCTGCGCAACAGGACGCGCTAG
PROTEIN sequence
Length: 243
SIVFEDEHVLVVDKPAGMVTHPGAGRPTGTLAAAALAHAPEMAGVGSPRRPGIVHRLDKGTSGLIVLAKTQPAYDALTAQLARRTVTRRYLCLAQGSVRRAQGVIDTTIGRDPRSRVRMAVLKEGKGKRAVTRFQVLERLGGAAGAVSFLECRLETGRTHQIRVHLASLGHPLLGDDTYRGRRAAPAGDPRLTDLIAGLGGVALHAAGLAFAHPTTGAPMEFSCLLPDRIGRILSHLRNRTR*