ggKbase home page

PLM1_60_coex_sep16_scaffold_8701_5

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4372..4548)

Top 3 Functional Annotations

Value Algorithm Source
Excisionase/Xis, DNA-binding protein bin=GWC2_Methylomirabilis_70_16 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 58.0
  • Bit_score: 87
  • Evalue 4.60e-15
DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 45.0
  • Bit_score: 53
  • Evalue 2.10e-05
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 58.0
  • Bit_score: 85
  • Evalue 1.90e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 177
GTGCTGCCCAAGGACACGATGGACGTGAAGGAAGTCGCGCGGTACCTCGCCATGGACGAGAAGACGGTGGCCCAGATGGCGATCGACCGCCTCATCCCGGCCGTCGAGCACGAGGGGAAGTGGCTCTTCTCCAAGAAGTCCATCGACAAGTGGCGCGGGCGCAGCGCCACGCGCTGA
PROTEIN sequence
Length: 59
VLPKDTMDVKEVARYLAMDEKTVAQMAIDRLIPAVEHEGKWLFSKKSIDKWRGRSATR*