ggKbase home page

PLM1_60_coex_sep16_scaffold_34310_2

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(651..1778)

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase superfamily protein bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 375.0
  • Bit_score: 624
  • Evalue 3.90e-176
histone deacetylase/AcuC/AphA family protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 378.0
  • Bit_score: 367
  • Evalue 4.20e-99
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 375.0
  • Bit_score: 623
  • Evalue 1.20e-175

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGACCACCGCGATCATCTATTCCGACGAGTGGCGCCAGTTCGACTACGGGCCGGAGCATCCGCTCCGCATGGAGCGGCTCGGGCTCACGTGGCGGCTCATGGAGGCCTACGGCCTCACCGTGCTGCCGCGTGCCAAGGTGTGGGCCCCCGAGCGCGCCGAGCTCGACGAGATCGCCCGCTTCCACTCGCGCGAGTACATCGAGATCCTGCGCGCGGTGAGCGCGGGCGACTGGGTGCCCGACGCCGCCCGCTACGGGCTCGGCCCCGGCGACAACCCGATCTTCCCGGGGCTGTGGGAGGCCGCCCAGCTCGGCGCGGGCGGCTCGCTGCTGGCGGCCCGGCTGGTGGCCGACGGGGAGGCCACGCGGGCCTTCCACTTCGCGGGCGGGCTGCACCACGCCATGCCCGGGCGCGCCTCCGGCTTCTGCTACGTCAACGACGCGGTGCTGGCCATCATGCGCCTGCGCGAGCGGGGCTTCCGGGTGGCCTACGTGGACATCGACGCGCATCACGGCGACGGGGTCCAGTTCGCGTTCTACGACGATCCCAACGTGCTCACCGTGTCCACCCACGAGCGCGGGGACCGGCTCTTCCCGGGCACCGGCTTCGTGGTCGAGATGGGCGAGGGCGCCGGCCTCGGGTACTCGGTCAACGTGCCGCTCCAGCCGCTCACCGACGACGCGGTCTACCACGAGGCCTTCGAGGCGGTGGTCCCGCCGCTGGTGACCGCCTTCAAGCCGGACGCCCTGGTCCTCCAGCTCGGCATCGATTCGCACCGGACCGACCCGCTCACCCACCTGAGCCTCACCGTGCAGGGCTTCACCCGCGCGGTGAAGCGGCTCCTGCCCCTGGCCCCCCGGGTCGTCGCGCTGGGCGGCGGCGGCTACGATCTGACCAACGTGGCGCGGGCCTGGACGGCGGCCTGGGCGGCCATGAACGACGTGGACCTGCCCCTGGACTTGCCGCGGGAGAGCCACCGGGACATGCAGCGGCTCGGGCTGGGGACCCTCTCCCTGGCCGATCCGGTCGAGGTCCTGCCTCCCGACACCCGCCGCTGGGCCGAGGAGTACGCGCGCCGGCAGGTGGGGGAGATCCAGGACAGAATATTCCCGCTGCACGGGCTGTAG
PROTEIN sequence
Length: 376
MTTAIIYSDEWRQFDYGPEHPLRMERLGLTWRLMEAYGLTVLPRAKVWAPERAELDEIARFHSREYIEILRAVSAGDWVPDAARYGLGPGDNPIFPGLWEAAQLGAGGSLLAARLVADGEATRAFHFAGGLHHAMPGRASGFCYVNDAVLAIMRLRERGFRVAYVDIDAHHGDGVQFAFYDDPNVLTVSTHERGDRLFPGTGFVVEMGEGAGLGYSVNVPLQPLTDDAVYHEAFEAVVPPLVTAFKPDALVLQLGIDSHRTDPLTHLSLTVQGFTRAVKRLLPLAPRVVALGGGGYDLTNVARAWTAAWAAMNDVDLPLDLPRESHRDMQRLGLGTLSLADPVEVLPPDTRRWAEEYARRQVGEIQDRIFPLHGL*