ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM3-1_170_b2_sep16_scaffold_1347_38

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: comp(27828..29714)

Top 3 Functional Annotations

Value Algorithm Source
argS; Arginine--tRNA ligase (EC:6.1.1.19) similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 629.0
  • Bit_score: 808
  • Evalue 7.00e-232
arginyl-tRNA synthetase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 628.0
  • Bit_score: 864
  • Evalue 6.50e-248
Tax=CSP1_1_Thaumarchaeota similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 628.0
  • Bit_score: 864
  • Evalue 9.10e-248

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_1_Thaumarchaeota → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1887
ATGACTCTGCGACTTTTGCTTGATGAAATAAGATCAAACATACAACAAATATGTTCCAAACTAAATTATCCAGAAATCAAGTTTGAAGTATCTGAAGCCTCAAGAGCAGAGTTTGGCGATGTAAGCTGTAATGTTGCATTTTTACTTGCAAAATCATTAAAGAAAAAACCATTTGATATTGCAAAAATTATTTCTGAAGAATACCAAAAAAATCCAGGCAAGTTTGTAAAGCAATCAGCCTCACATCCTTCAGGATATGTGAATTTTTTTGCAAACTATGCCGAATTAAACAACGCGATAATTTCCACATCATCTGAAAAAAACTATGGAACAATAAACATTGGGAAAAACTCCAAGGTTGTAGTAGAGCATACCAGTGTAAACCCAAACAAAGCGTTACACATTGGACATGTAAGAAACATCATAATCGGTGATGCTGTAGCTAGAATTCTAAAAAAAGCGCATTATGATGTACGAATCTTAAACTATGTAGATGATTCTGGTTTGCAAGTTGCAGATATCATTGTTGGATTCAAGTATGGTGGATTTCCTGCAGAACCGCCAGGAGATCAAAAGTTTGATCATTACTGTGGTGATATAGTATATGTCAAGACTACAGAAAAGTATGAAACAGATCCGAAACTTGCTACATATAGAACCGAAGTATTAAAGCAACTTGAAGAAGGAACATCAGAAACTGCCAAGTTTGCTAATGATATCACAAGACGCGTTCTTGCTGAGCAGCTAAAGACATGTTGGCGTCTTGGTGCCACATATGACTGTCTCAATTTTGAGTCTCAAATTGTTCGCTCAAACCTATGGAAAATAGTATTTGATAAGATGAAGGATATGCAACTTGTAGATCTAGAAAAAGAAGGCAAAAACGCTGGGTGCTGGGTCATCAAATCTGAAAACGATGAAGAAGACAAGGTGCTTGTTAGAAGTAACGGTATTGCTACATACATTGCAAAAGACATACCATATGCAGCATGGAAGCTTGGAATTTTAGAAGATCCTTTCTACTATACAAAATATGCTAAGCAATCTGATAATAAAATATTATGGGAGACAGTACTTGAAAAAAATTCAAACTCAAAGCTTGACTTTACTGGAGACAAGGTAATAACAGTCATCGATTCGCGTCAATCACGTCTGCAAACAATAATTACAAAACTAATGTCTAGTTTCAAATCACAAGAAGGTGCATACGTTCACCTTGGATATGAGTCAGTAACGCTTAGTGCAGAAACTGCAAATACACTAAACGTAGATACCGGAGGAAAACAAGTTCAAATGTCTGGACGAAAAGGAATCTACGTTAACGCAGATTTTGTTCTTGATATTTTAAGAGTAAAAACATACGAAGAAGCAAAGAAAAGAAATTCCGAGCTAGACGAACCAAAACTAGCAGAGATCGCAGAACAAGTTGCTGTTGGTGCACTACGTTATGCTATGATAAAACAGGATTTAGACAAAATCATAACATTTGACATGACAGAATCTCTGAGTCTTGAAGGTGACACTGGACCTTACATACAATATGCTCATGCTAGAGCTGCAAGAATTTTAGAAAAGGCAGAAATGAAACCAAGATTTGAAGTTTCGTTTGCCAATCTTACTACAGAACATGAGATTAATCTAATCAAAATTATAGGTAAATTTGATATTCAGGTAGAGGATGCAGCAAAAAACCTCTCTCCAAAAATAATTGCACGATATTGTTATGATCTTGCAGTCTCATTTAATGGATTTTATGAGCATGTCAAAGTTCTAACGGCAGAAAACAAGGACCTGATTAACGCAAGACTATGCCTAGTATACAGCTTTAAGGAAACTCTTGCAAAAGCACTTGATATCATTGGAATTGCATCGCCAGACAGAATGTGA
PROTEIN sequence
Length: 629
MTLRLLLDEIRSNIQQICSKLNYPEIKFEVSEASRAEFGDVSCNVAFLLAKSLKKKPFDIAKIISEEYQKNPGKFVKQSASHPSGYVNFFANYAELNNAIISTSSEKNYGTINIGKNSKVVVEHTSVNPNKALHIGHVRNIIIGDAVARILKKAHYDVRILNYVDDSGLQVADIIVGFKYGGFPAEPPGDQKFDHYCGDIVYVKTTEKYETDPKLATYRTEVLKQLEEGTSETAKFANDITRRVLAEQLKTCWRLGATYDCLNFESQIVRSNLWKIVFDKMKDMQLVDLEKEGKNAGCWVIKSENDEEDKVLVRSNGIATYIAKDIPYAAWKLGILEDPFYYTKYAKQSDNKILWETVLEKNSNSKLDFTGDKVITVIDSRQSRLQTIITKLMSSFKSQEGAYVHLGYESVTLSAETANTLNVDTGGKQVQMSGRKGIYVNADFVLDILRVKTYEEAKKRNSELDEPKLAEIAEQVAVGALRYAMIKQDLDKIITFDMTESLSLEGDTGPYIQYAHARAARILEKAEMKPRFEVSFANLTTEHEINLIKIIGKFDIQVEDAAKNLSPKIIARYCYDLAVSFNGFYEHVKVLTAENKDLINARLCLVYSFKETLAKALDIIGIASPDRM*