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PLM3-1_170_b2_sep16_scaffold_829

Search features with annotation key words

Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_829_31
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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29562..30176
DNA (615bp) protein (205aa)
YceI family protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KV57_HALH1
hypothetical protein
tRNA modification GTPase {ECO:0000313|EMBL:AHM63427.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
PLM3-1_170_b2_sep16_scaffold_829_32
unknown

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30186..30422
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_829_33
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30434..30832
DNA (399bp) protein (133aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI000379E601
hypothetical protein
YceI family protein {ECO:0000313|EMBL:AEE49223.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3-1_170_b2_sep16_scaffold_829_34
Caldithrix abyssi, Caldithrix, Bacteria

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comp(30851..32194)
DNA (1344bp) protein (448aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Caldithrix abyssi DSM 13497 RepID=H1XW99_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EHO43004.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
NtrC family response regulator
PLM3-1_170_b2_sep16_scaffold_829_35
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(32184..33614)
DNA (1431bp) protein (477aa)
ial:IALB_1310 Signal transduction histidine kinase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Signal transduction histidine kinase
Tax=CG_Ignavi_02
PLM3-1_170_b2_sep16_scaffold_829_36
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(33696..34217)
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHW7_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH48574.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b2_sep16_scaffold_829_37
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(34204..34842)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHW7_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH48574.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b2_sep16_scaffold_829_38
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(34985..35152)
DNA (168bp) protein (56aa)
Cytochrome c-552 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=NRFA_SHEAM
nrfA; cytochrome c552
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_829_39
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(35197..35961)
DNA (765bp) protein (255aa)
Iron-sulfur cluster repair di-iron protein Tax=Pontibacter sp. BAB1700 RepID=J1FET2_9BACT
hemerythrin HHE cation binding domain-containing protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_829_40
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(36029..36499)
DNA (471bp) protein (157aa)
SCO1/SenC/PrrC family protein Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X9Z3_FLACA
SCO1/SenC/PrrC family protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_829_41
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(36657..37439)
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D2V3_9BACT
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_829_42
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(37441..38931)
DNA (1491bp) protein (497aa)
Major anaerobically induced transmembrane protein Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7YQP8_BDEBC
major anaerobically induced transmembrane protein
Major anaerobically induced transmembrane protein {ECO:0000313|EMBL:AFY02206.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus str. Tiberius.;"
PLM3-1_170_b2_sep16_scaffold_829_43
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(39081..39512)
DNA (432bp) protein (144aa)
Putative transcriptional regulator bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
transcriptional regulator
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_829_44
unknown

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comp(39577..39738)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_829_45
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(40002..40907)
DNA (906bp) protein (302aa)
Cation diffusion facilitator family transporter Tax=Melioribacter roseus (strain P3M) RepID=I6ZXP2_MELRP
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AFN73823.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
PLM3-1_170_b2_sep16_scaffold_829_46
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(40923..41567)
DNA (645bp) protein (215aa)
Uncharacterized protein bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PLM3-1_170_b2_sep16_scaffold_829_47
unknown

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comp(41677..42012)
DNA (336bp) protein (112aa)
TPR domain-containing protein Tax=Brachyspira pilosicoli RepID=K0JJR6_BRAPL bin=RAAC39 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RAAC39 organism_group=Ignavibacteria
Displaying items 31-47 of 47 in total

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