ggKbase home page

PLM3-1_170_b2_sep16_scaffold_81126_1

Organism: PLM6_170_b2_sep16_Ignavibacteria_34_7

near complete RP 51 / 55 MC: 6 BSCG 50 / 51 ASCG 12 / 38
Location: 2..676

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase D, ATP-dependent Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E922_GEOBB similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 218.0
  • Bit_score: 320
  • Evalue 7.30e-85
ligD; DNA ligase D similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 218.0
  • Bit_score: 320
  • Evalue 2.10e-85
Tax=GWC2_Ignavibacteria_rel_36_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 224.0
  • Bit_score: 413
  • Evalue 1.20e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Ignavibacteria_rel_36_12_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 675
GAAAAAATTTATTCCGAGCATAATGAAAAAGATATTAACTACTTAGTCTGCAATGATGAAGCAACTCTTATTTATCTTGCAAACTTAGGCTGTATTGAAATTAATCCCTGGTTTTCAAGAGTGGAAAATCTTGATAACCCTGATTACCTTGTTATTGATCTTGATCCTGAGGATATCTCATTTGATAAAGTTGTTGAGGCAGCTTTAGCAGTTAAAGAAATCCTGGATATTGCGGGGGCAAAAAGCTATTGCAAAACTTCAGGTGCAACAGGTCTTCATATTTATGTCCCTCTTAATGCTAAATATGATTATGATGTTGCAAGAGACTTTGCACAGCTTGTAGCACAGTTTGCTTATCAAAAAGTACCTGGCTTTACGAGTCTTCAAAGGAGTCCATCTAAAAGACAAAAGAAAGTTTATTTAGATTATCTTCAGAACAGACCTGGACAAACTCTTGCCGCTCCTTACAGTGTAAGACCAAGACCGGGGGCTACTGTTGCTACTCCTCTAAAGTGGGAAGAAGTAAAAACAGGTTTGGATCCAAAAAATTATACTATCAAAAATACTTTAGAAAGATTGGGAAAGATAGGAGATATTTTTAAAGATGTTCTCGGCAAAGGAATAGATATTGGAAAATGTATAAACAAGCTTGAGGCTTATGCAAAGAAAAAGTAG
PROTEIN sequence
Length: 225
EKIYSEHNEKDINYLVCNDEATLIYLANLGCIEINPWFSRVENLDNPDYLVIDLDPEDISFDKVVEAALAVKEILDIAGAKSYCKTSGATGLHIYVPLNAKYDYDVARDFAQLVAQFAYQKVPGFTSLQRSPSKRQKKVYLDYLQNRPGQTLAAPYSVRPRPGATVATPLKWEEVKTGLDPKNYTIKNTLERLGKIGDIFKDVLGKGIDIGKCINKLEAYAKKK*