ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

PLM3-1_170_b2_sep16_scaffold_22457_2

Organism: PLM6_170_b2_sep16_Nitrososphaera_viennensis_49_7

near complete RP 30 / 55 MC: 1 BSCG 17 / 51 ASCG 35 / 38
Location: 1018..2145

Top 3 Functional Annotations

Value Algorithm Source
dbh2; DNA polymerase IV (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 376.0
  • Bit_score: 479
  • Evalue 7.60e-133
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 376.0
  • Bit_score: 479
  • Evalue 3.80e-132
DNA polymerase IV Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN64_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 376.0
  • Bit_score: 479
  • Evalue 2.70e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1128
ATGCTCACCGAAGGTCAGGAGGGCAGCAAAACTGCAAGGATCATCCTTCATATTGATTTCGATTATTTTTTCGCCCAGTGCGAAGAAATAAGGGATCACAGCTTGAAGACCAAGCCCGTAGTGGTTTGTGTTTTCTCCGGCCGTGGAGAAGATAGTGGAGTCGTGAGCACTGCCAATTACAAGGCAAGAGAATACCACGTTAAGTCAGGCATTCCCATCAAATTAGCCAAGTCAAGGCTCGCAGCCGCAAGCGATGCAGTATTTTTGCCCCTTGATTCCAATTACTACTCTGAAATGTCAGAAAAAGCAATGTCCGTGATTCGATCGTTGGCAGATAATGTCGAGCGAGTCGGGATCGATGAATGTTACATTGATGTTTCTGGAAAGACGGCCAACTATGAATTAGCCTCCCAATTTGCAAACCGGATCAAAGATGAAGTGAAGAAACGCACAAGATTGACCTGTTCGATTGGCGTCGCCCCAAACAAGATGCTTGCAAAGATGGCATCTGACGCGCACAAGCCAGATGGCTTGACGGTAATCGAACCTGCAGTGGTTGGCAAGTTTATCTCACAAATGATTGTCGAGAAGGTGCCCGGCATAGGGCCCAAGACAGGAGCCAGGCTGCGTGATTTAGGTGTGAATACAGTAGGAGATCTAGCTACTTTCGATCTTTTTAAGCTAATAGAAACTTTTGGGAAAAAGACAGCGACTTACATGCACAATGCGGCAAGTGGCATCGACGATGAACCTGTAGTCGATTCAGATAGTAAGAAGCAGATAGGTCGTATAGTCACGCTGAAAGGCGATGCAACCACAAGCGTTGAAATGTACCCTGAGCTTTACAAGATTTGTCAGTCAGTACTGAAAACTGCAAACACAAACAAACTTTCATTCAAAACGGTTGGAGTGATTCTGGTCCTTGATGATCTCAATCAAAGATCGAAATCAAAGAGCCTGAAAGCCCATACGAATAATTTCGAAACGCTACATTCTACTGCGAAGTCAATACTGGACCAGGCAATGGCGAGCCCGAACAGGATCGAAGTAAGGAGGCTAGGATTGCGGTTGTCGGACTTTAGGAAGACCGCCGGCCAAAACACAATGTCACAATTTATTGGCGGCTAG
PROTEIN sequence
Length: 376
MLTEGQEGSKTARIILHIDFDYFFAQCEEIRDHSLKTKPVVVCVFSGRGEDSGVVSTANYKAREYHVKSGIPIKLAKSRLAAASDAVFLPLDSNYYSEMSEKAMSVIRSLADNVERVGIDECYIDVSGKTANYELASQFANRIKDEVKKRTRLTCSIGVAPNKMLAKMASDAHKPDGLTVIEPAVVGKFISQMIVEKVPGIGPKTGARLRDLGVNTVGDLATFDLFKLIETFGKKTATYMHNAASGIDDEPVVDSDSKKQIGRIVTLKGDATTSVEMYPELYKICQSVLKTANTNKLSFKTVGVILVLDDLNQRSKSKSLKAHTNNFETLHSTAKSILDQAMASPNRIEVRRLGLRLSDFRKTAGQNTMSQFIGG*