ggKbase home page

PLM3-1_170_b2_sep16_scaffold_23430_2

Organism: PLM6_170_b2_sep16_Methylomirabilis_oxyfera_65_6

near complete RP 44 / 55 BSCG 44 / 51 ASCG 8 / 38
Location: 497..1306

Top 3 Functional Annotations

Value Algorithm Source
RNA pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 253.0
  • Bit_score: 263
  • Evalue 6.10e-68
Pseudouridine synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 253.0
  • Bit_score: 263
  • Evalue 2.20e-67
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 241.0
  • Bit_score: 385
  • Evalue 5.30e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 810
GTGGGGGATCGCCCCGGGCCAGGGGCCTCGCCGACCGCACCGGAATCTTCGGGCGAAGGTCCGGGCGAGCGGCTGCAGAAGGTCTTGGCCCGGGCGGGGATTGCGTCGCGCAGGCAGTGCGAACTCCTGATCGCGGCGGGGCGCGTGCAGGTCAATGGCCAGGTGGTGCGGACGCAGGGCGTCCGGGTACGGCCGGAGCGGGACCGCATCCAGGTGGATGGGCAGATGGTCCGTGCCGAGAAACCTGTCACCATCCTCCTGCACAAACCGGCCGGCTACATCACCTCGCGGTCGGACCCCCAGGGCCGTCCGGTGGTGACTTCGCTCCTGCCGCCGACGGGCCTGCCGCGGCTGTTCCCGGTGGGACGCCTGGACTGGGACACCGAGGGGCTGCTCCTCCTCACCAATGACGGGGAGCTGGCCTACGCCCTAACCCATCCCCGCTTCGGCGTGCGGAAGGTCTATCACGCCAAGGTCAAGGGGCACCCGACGCCTGATGCCCTGGCGCGTCTCACGCGCGGAGTCATCTGCGACGGCGAGCCCCTCAAGGCCCTGGCGGTGGAGATGCTCCGTCCCACTCGCCAGAATGCGTGGATCGCCATCAGCCTCGACCAGGGGCGCTATCGCCAGGTCCGACGCATGTGGGAGGCCGTCGGGTATCTCGTCCTGAAACTCATCCGGGTGGCCGTGGGACCCATCCATCTCGGATCGCTGCCCCGGGGGCAGTGGCGCTCGCTCTCGCCGGCCGAACTCCGGAGCCTGCGTCCCGGCGTGCCGGACACGACTCAGCCTGGCGCGTGGGCCCGCTGA
PROTEIN sequence
Length: 270
VGDRPGPGASPTAPESSGEGPGERLQKVLARAGIASRRQCELLIAAGRVQVNGQVVRTQGVRVRPERDRIQVDGQMVRAEKPVTILLHKPAGYITSRSDPQGRPVVTSLLPPTGLPRLFPVGRLDWDTEGLLLLTNDGELAYALTHPRFGVRKVYHAKVKGHPTPDALARLTRGVICDGEPLKALAVEMLRPTRQNAWIAISLDQGRYRQVRRMWEAVGYLVLKLIRVAVGPIHLGSLPRGQWRSLSPAELRSLRPGVPDTTQPGAWAR*