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PLM3-1_170_b2_sep16_scaffold_28610_3

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_34_6

near complete RP 24 / 55 MC: 2 BSCG 16 / 51 MC: 1 ASCG 31 / 38 MC: 1
Location: comp(1166..1759)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 197.0
  • Bit_score: 376
  • Evalue 1.40e-101
tRNA-splicing ligase RtcB Tax=uncultured crenarchaeote 29d5 RepID=D4N704_9CREN similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 197.0
  • Bit_score: 376
  • Evalue 9.80e-102
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 197.0
  • Bit_score: 321
  • Evalue 1.10e-85

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Taxonomy

uncultured crenarchaeote 29d5 → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 594
ATGTATTCAGCACTAAATTTTGCGTGGTCAAACCGACAATTGATAACGCATTGGACAAGAAAAACATTTGAAAAGATAATGGGAATGACTGAAGATGAGACAGATATGAAGTTAGTATATGATGTTTCACATAACATAGCTAAAGTCGAAAGACATGCTGTAGATGGTGAAGGAACAAGAGACCTGGTAATACATAGAAAGGGGGCTACAAGAGCATTTCCAGCTGGCGATAGTCATATTCCAGACAAGTATCGCAATATTGGTCAACCAGTTTTTATTCCAGGTTCAATGGGAACCGCAAGCTGGATACTACTTGGAAATTCAAAATCATTAGAATTAAGTTTTGGTTCAACAGCGCATGGTGCAGGTAGAACAATGTCTAGGTCTGCCGCAAGGAGAAACTATACAACAGATAGTGTAAGAAAAAATTTAGAATCAAAAGGAGTTTATATAAAAGCTCTGAGCAGGGAAGGAATGGTTGAAGAAACTCCTGAAGCATACAAGGATGTAGATTCTGTAGTTCAGGTGTCCCATGCTCTTGGCATAGCAACGAAGGTTGCACGCTTAGTACCAATTGGGGTGATCAAGGGATGA
PROTEIN sequence
Length: 198
MYSALNFAWSNRQLITHWTRKTFEKIMGMTEDETDMKLVYDVSHNIAKVERHAVDGEGTRDLVIHRKGATRAFPAGDSHIPDKYRNIGQPVFIPGSMGTASWILLGNSKSLELSFGSTAHGAGRTMSRSAARRNYTTDSVRKNLESKGVYIKALSREGMVEETPEAYKDVDSVVQVSHALGIATKVARLVPIGVIKG*