ggKbase home page

PLM3-1_170_b2_sep16_scaffold_1552_9

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(4827..5585)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein, family 1 Tax=Variovorax paradoxus B4 RepID=T1XCN8_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 259.0
  • Bit_score: 141
  • Evalue 8.90e-31
extracellular solute-binding protein, family 1 similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 259.0
  • Bit_score: 141
  • Evalue 2.50e-31
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 232.0
  • Bit_score: 159
  • Evalue 3.40e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGAATTTCTGGGCGCGAATTATTGCAGTCATGATCGTCAGCATAGCGGGAGGTGCCATGTCGCACGCGGCCGAACTTACCGTCCTGGCCAGCCAGGGCAATCTGCCCGGGGTGAACGAGCTCGCCGCTGCCTTCGCGCGCGCGAGCGGGCACAAGGTGACGGTCCTTCAGGAGGTGGGCAAGGCCCTGGAGCAGAGGCTTAGCAACGGACCCGCAGACCTGGTGACGGGCAACCCGACGATGATGGAAGAGGTGCTCAAGAAAGGTCAACTCGTGGCCGGCACCGTGACGCCCTTCATGCTCGCCGGTCTCGGCGTCTCGGTGCGCGCCGGCGCGCCAAAGCCCGACATCGGCACAGTCGAGGCATACGCCAAGGCATTGCTAGCGGCGAAATCGATCGGCTATTCGCGCGGCTGCAGCGGCCAGCATGTCGCGCAGGGAATCGCGCAGCTCGGCCTGACGGAGCAGTTGAAGCCGAAGATCGTTCTCACCGGTGGCGGCACCGGTCCGGTCACCTTTTTCCTGGCGCGCGGCGACTTCGAGCTCGGCATTCAGCAGAGTAACATCATGGTGGGCGCGCCGGGAACCGATTTTGTCGGGCCCGTGCCCGGACCCGTGAACATACCTTGTCCAAGCAGCGTTGGTCTGCTGACGGTTTCCAAGGAGCGGGACGCTGCACAGGCGATGATCAAGTTCATGATCTCGCCGGCGGCCGCTCCACTCCTGCGCAGGGTGCATGAGGAGCCGGCCAAGGGCTGA
PROTEIN sequence
Length: 253
MNFWARIIAVMIVSIAGGAMSHAAELTVLASQGNLPGVNELAAAFARASGHKVTVLQEVGKALEQRLSNGPADLVTGNPTMMEEVLKKGQLVAGTVTPFMLAGLGVSVRAGAPKPDIGTVEAYAKALLAAKSIGYSRGCSGQHVAQGIAQLGLTEQLKPKIVLTGGGTGPVTFFLARGDFELGIQQSNIMVGAPGTDFVGPVPGPVNIPCPSSVGLLTVSKERDAAQAMIKFMISPAAAPLLRRVHEEPAKG*