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PLM3-1_170_b2_sep16_scaffold_1746_6

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(5005..5886)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 298.0
  • Bit_score: 215
  • Evalue 4.30e-53
ribosomal large subunit pseudouridine synthase C similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 294.0
  • Bit_score: 186
  • Evalue 1.00e-44
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 293.0
  • Bit_score: 369
  • Evalue 2.50e-99

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Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCCCGAAGAGATTCTCCTTGCCGCCGATGAGGCGCCGAAAAAACTTGAGAACTTTCTCAAGAAAAGGTTTCCGGTCGGCTACGTGAGAAAGTTATTCAGAAAAAACGGCATCAGGCTCAACGGCAAGCATCCCAAGCCCGATGACGTCGTCCGCGCCGGCGACCGGATTCTATTCTACATCCCGTTTGAAACCAACGTCCTGCCCCGAAAACCTGTGAGTATCGCTGCTAAAATGAATCTCATCTTCGAAGACGATGCGCTGCTCGTCATCGACAAGCCCGCCGGTCTCCCCGTCCACGAGGGAAAAACTGTTGCCAGGCGCGATTCGGTTTTGGGTATTCTTGACAGCCGCTATCGAGGAAAAGCTGTAACGCCCAAGCTCGTGCACCGCCTGGACAAGGACACCTCAGGCCTGCTGCTGGTTGCCAAGAATGAGATGCTCGCTCAAGAGCTGGAAAGTCGCTTCGAGTCCGGCAGCGTCGGCAAGGAATATCTTTGTCTGCTGGCTGGCCGGCTGCCGAAAAACGAAGGCGTCATTGATTCGCCGCTGCCGGGCCGGGAGGGCAACGAGGTACGGGCGATGACCCGATTCAAAGTCGAAAAGCGATTTTCAGATACGACCCTCGCCCGAGTGAGGATCGAAACGGGTCGCATGCACCAGATCCGGTTGCACTTCGCCAAGCTCGGCTATCCGGTCGTCATGGACGATCAGCACGGCGATTTCGCCTTCAACAAACGTTACCGCAAACAATATGGTCTCAAGCGCCAGTTCTTGCACGCGTCGACACTGACGCTGGATTACCGCGGGAAGAAGCGGAGGTGGACCGCGCCGCTTCCCAACGATTTAGCGCGAACACTAGAATTGCTGGCGCGCAAATAG
PROTEIN sequence
Length: 294
MPEEILLAADEAPKKLENFLKKRFPVGYVRKLFRKNGIRLNGKHPKPDDVVRAGDRILFYIPFETNVLPRKPVSIAAKMNLIFEDDALLVIDKPAGLPVHEGKTVARRDSVLGILDSRYRGKAVTPKLVHRLDKDTSGLLLVAKNEMLAQELESRFESGSVGKEYLCLLAGRLPKNEGVIDSPLPGREGNEVRAMTRFKVEKRFSDTTLARVRIETGRMHQIRLHFAKLGYPVVMDDQHGDFAFNKRYRKQYGLKRQFLHASTLTLDYRGKKRRWTAPLPNDLARTLELLARK*