ggKbase home page

PLM3-1_170_b2_sep16_scaffold_2830_3

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 1708..2439

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2D7_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 242.0
  • Bit_score: 238
  • Evalue 5.20e-60
pseudouridylate synthase I similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 242.0
  • Bit_score: 238
  • Evalue 1.50e-60
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 243.0
  • Bit_score: 323
  • Evalue 1.30e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
GTGAACATCAAACTTACCGTTGAATACGACGGGACGAACTATCACGGCTGGCAGATCCAACCCAAGGGCGAAACCATCCAATCGGTTCTTGAGCAGGCGGTTTCCACTTTTCTCCGAAAGCCCACACGCGTGACCGGCTCCGGGCGGACCGACGCCGGCGTGCATGCGCTGGGGCAGGTGGTTAATTTCTTTTCCGATGAAGATTTCGACCCGTACCGCATCCAGCGCGCTCTCAACGCGCTGACGCCGGATGACATCACGATCAAAGAAGTCGAGATCGTCGCGGATTCCTTCGACGCCCGCAGGAACGCGCGTGGCCGCGTCTATGAATACCGAATCCTCAATCGTTCCACCCCTTCGCCGTTCCATCTAAATCGCGCCTGGCGTTTACACGAGCGATTGGATTTGCAGGCCATTCGCGCGGCGATCCGCTGTCTCGAAGGAGAGCATGACTTCTCCTCCTTCCGGGCCGCCGGCTGCGACGCCGCCCATCCCGTGCGAACAGTTTACCGCGTGTCTTTAGATCAACGAGACGAGCTTCTGGTTTTTACGATCGAAGCGACGGCTTTTCTCCGCCACATGGTGCGCAATATCATCGGCACACTCGTCGAAGTCGGCCGCGGCCTGCGCACGGCTGAATCCTTCGCCGAATTACTCGAAGCGCGCGACCGAACCAGAGCCGGAGCGACTGCGCCGCCGTGCGGGTTGTTTTTGGTGGAGGTGAAGTATTAG
PROTEIN sequence
Length: 244
VNIKLTVEYDGTNYHGWQIQPKGETIQSVLEQAVSTFLRKPTRVTGSGRTDAGVHALGQVVNFFSDEDFDPYRIQRALNALTPDDITIKEVEIVADSFDARRNARGRVYEYRILNRSTPSPFHLNRAWRLHERLDLQAIRAAIRCLEGEHDFSSFRAAGCDAAHPVRTVYRVSLDQRDELLVFTIEATAFLRHMVRNIIGTLVEVGRGLRTAESFAELLEARDRTRAGATAPPCGLFLVEVKY*