ggKbase home page

PLM3-1_170_b2_sep16_scaffold_5434_6

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(5277..6290)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 331.0
  • Bit_score: 437
  • Evalue 1.00e-119
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 327.0
  • Bit_score: 143
  • Evalue 6.80e-32
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 337.0
  • Bit_score: 442
  • Evalue 4.60e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGATGCTTGGTAGAAGGATGCGGCTTGGACTTGTCGGTGCGCTCGTTGTCCCGCTCGTAGTGTTCGCCTGGAGCAGTGGCGCGCGCGCGGCCGAAATGAAGCCGGCAATCATCCGCTTGGACTTTATCATCGGCGGCAAGCACGCGCCGTGGTTCGTGGCGCTGGAGAAAGGTTTCTATGCGACGCGCGGCTTGAACGTGACCATCCTGGCAAGCGGGGGCTCGGCGGACACGGTCAGGACGATCGGCGCGGGCGGGGCGGATTTTGGTTTCGCCGATATCGGGACGATGATCGTGGCCAAATCCCGCGGCACGCCAGTGCAAGCCGCGGCGCAGTTCGGATACGTTCCGGCGACGGTGATGTGGCGCGACGAGGGAGTGATCAAAGGGATCAAAGACCTGGAAGGGAAGTCGTGGGCGATCAGTCCGGGACAGGCGCAATGGTATTTGATGCCGGCCTACTGCCGCATCAACAAGATCGATTTCAAAGCGATCAAGATTCAGGAAACCGCGGCGCCGATCCAGCCGGCGGCGTTGGCGACCAAGAAAACGGATTTTATCGTCATGTACCGGGCATCCAATGAGGAAGTGGCGGACTTGGCTGCGTCAAAAGTCGGCGTCAAGCTGCAACGGGTGGTGATGAAGGATACCGGTCTCGACATCTATGGGACCAGTCTGATCGTCAAGGATGAGGATGTCAAAAAGCGGCCTGAATTCGTCCGCGCCTATGTCGAAGCGACCCTGGAGGGCTTGCGCTATGCCCGCGACAACCAGGAAGATTCGCTCAAGATCCTCCTCAAGCATAAACCCGAGCTGGAGCCGGTACTGACCACGCTGCAGCTCAAAAACGCGTTGACGGAGGTGTTTCTGCCGGTGGAGTCGGCGCAGCTCGGCTTGGGCTTCATGAAGCCGGAGATCATGGAGAAGACGGTTCGGGTGACCAACGAGTACTTCGACGTGGGCCGGAAAGTCACGGCGAAGGAAGTGTATACCAACCAATTTATCAAACGCTAA
PROTEIN sequence
Length: 338
MMLGRRMRLGLVGALVVPLVVFAWSSGARAAEMKPAIIRLDFIIGGKHAPWFVALEKGFYATRGLNVTILASGGSADTVRTIGAGGADFGFADIGTMIVAKSRGTPVQAAAQFGYVPATVMWRDEGVIKGIKDLEGKSWAISPGQAQWYLMPAYCRINKIDFKAIKIQETAAPIQPAALATKKTDFIVMYRASNEEVADLAASKVGVKLQRVVMKDTGLDIYGTSLIVKDEDVKKRPEFVRAYVEATLEGLRYARDNQEDSLKILLKHKPELEPVLTTLQLKNALTEVFLPVESAQLGLGFMKPEIMEKTVRVTNEYFDVGRKVTAKEVYTNQFIKR*