ggKbase home page

PLM3-1_170_b2_sep16_scaffold_7831_2

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 795..1388

Top 3 Functional Annotations

Value Algorithm Source
Putative lysine decarboxylase Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MBZ3_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 184.0
  • Bit_score: 242
  • Evalue 2.90e-61
lysine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 184.0
  • Bit_score: 242
  • Evalue 8.20e-62
Putative lysine decarboxylase {ECO:0000313|EMBL:CCJ47580.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 184.0
  • Bit_score: 242
  • Evalue 4.10e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella parapertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGCAATTTGAACGGACGAATCTGCGTTTTCACCGGGTCGCAGTCGGGCGCGCGCGCCGAGTACGCGGACGCGGCGCGGCAAATGAGCCGCGAGTTGGTCGAGCGCGGCTATGGTCTGGTCTATGGCGGTGGCAACGTCGGGCTGATGGCGGTGATCGCGGACGCTGCGCTGGAGCGCGGCGGCCATGTAACCGGCGTGATTCCGGATGCGCTCGTGAGCCAGGAAGTCGCGCACCGCGGTCTCTCCGAGCTGCGCGTCGTGCAGTCGATGCACGAGCGCAAGGCGCTGATGGCCGAGCTATCGGACGGCTTCATCGCCATGCCCGGCGGCATCGGCACCATGGAGGAATTCTTCGAAGTGCTGAGCTGGGCGCAACTCGGCCTGCACGACAAACCTTGCGGCCTCTTGAATATCGGCGGTTACTACGACCATCTCATTCGCTTTATGAATCACGCCGTGGACCAGGAATTTCTCAAGCCGAAGCATCGCGCCTTGCTGATCGTGGAAAACGATCCGGCGATGCTGCTCGATCGATTCGCGGCGGCACTTGCCGGCCAGCCGGCAAAACGGTTCGACCGAGACGCGACCTGA
PROTEIN sequence
Length: 198
MSNLNGRICVFTGSQSGARAEYADAARQMSRELVERGYGLVYGGGNVGLMAVIADAALERGGHVTGVIPDALVSQEVAHRGLSELRVVQSMHERKALMAELSDGFIAMPGGIGTMEEFFEVLSWAQLGLHDKPCGLLNIGGYYDHLIRFMNHAVDQEFLKPKHRALLIVENDPAMLLDRFAAALAGQPAKRFDRDAT*